31P MR Imaging with Radial bSSFP Data Acquisition and 1H Constraint Iterative Reconstruction
Kristian Rink1, Moritz C. Berger1, Nadia Benkhedah1, Christine Gnahm1, Peter Bachert1, and Armin M. Nagel1,2

1German Cancer Research Center (DKFZ), Heidelberg, Germany, 2University Medical Center Ulm, Ulm, Germany

Synopsis

Phosphorus (31P)-containing biomolecules play a crucial role in the energy metabolism of all cells. Since the in vivo MR signal of 31P is four orders of magnitude smaller compared to hydrogen, strategies to improve the signal-to-noise (SNR) are required. Therefore, this study focuses on the development of a signal-effective 31P acquisition in combination with a constraint iterative reconstruction applying prior knowledge from recorded hydrogen (1H) data.

Purpose

Phosphorus (31P)-containing biomolecules play a crucial role in the energy metabolism of all cells. In comparison to hydrogen (1H), the in vivo MR signal of 31P is four orders of magnitude lower. Therefore, this study focuses on the development of a signal-effective 31P acquisition [1] combined with a constraint iterative reconstruction employing prior knowledge from recorded 1H data [2].

Methods

Two healthy volunteers were examined on a 7 T whole body MR system (Magnetom 7 T, Siemens Healthcare, Germany) using a double-resonant (31P/1H) quadrature birdcage coil (Rapid Biomed GmbH, Germany). Due to the distinct chemical shift of 31P-containing molecules, frequency selective excitation was performed by a Gaussian RF-pulse with a full width at half maximum (FWHM) of 3.5 ppm (420 Hz) to differentiate phosphocreatine (PCr) [3]. A 3D radially-sampled and density-adapted [4] balanced steady-state free-precession (bSSFP) sequence (cf. Fig. 1) was applied [5] with the following measurement parameters: TR=7.21 ms, TE1=2.34 ms, TE2=4.87 ms, nominal α=30°, TA=30 min, BW=1000 Hz/px, 1000 projections, A0=3.7 mT/m, t0=0.5 ms, 1.5 cm isotropic resolution, 84 averages. In order to enhance the signal-to-noise ratio (SNR), the absolute values of the acquisitions from each contrast (Fig. 2A) were summed up (Fig. 2B). A Hamming filter was used to reduce Gibbs ringing and to further increase the SNR for gridding-reconstructed images (Fig. 2C). To represent the anatomy of the head, 1H Fast Low Angle Shot (FLASH) images (TR=8.1 ms, TE=4.9 ms, nominal α=10°, TA=6 min, BW=500 Hz/px, 1 mm isotropic resolution) were acquired. Furthermore, 31P images were iteratively reconstructed using prior knowledge from 1H data (cf. Fig. 2). Therefore, the reconstructed image (Fig. 2F) is attained by minimizing the objective function $$ f(x) = \frac{1}{2} \parallel \!A x - y\parallel _{2}^{2} + \sum_{i} \tau_{i} R_{i} $$ where A denotes the system matrix, describing the imaging process that maps the image vector x on the corresponding raw data vector y. The regularization terms Ri are weighted with constant factors τi to enable a manually adjustable influence of the regularization. While the first term ensures data consistency by including a squared L2-norm, the second part of the objective function describes the prior knowledge of the image in terms of the sum of regularizations. Information from registered 1H images (Fig. 2D) was used to spatially confine the support region. This was done using a binary mask (Fig. 2E) comprising only brain tissue where PCr is expected. Hence, non-zero pixel intensities of the 31P data outside the object, which originate from noise or artifacts, were suppressed. This regularization is expressed by $$ R_{BM}(x) = \parallel \!BM \cdot x\,\parallel _{2}^{2} $$ where BM is a diagonal matrix of ones and zeros obtained from the binary mask [6]. The iterative reconstruction was performed with 300 iterations and a weighting factor of τ=4. Reconstructed images employing those parameters led to the lowest deviation to a ground truth image in analytical phantom studies.

Results and Discussion

Fig. 3 illustrates the superposition of anatomical 1H images with physiological 31P acquisitions. While for gridding-reconstructed images combined with a Hamming filter tissue boundaries are blurred, the iterative reconstruction yields sharp tissue boundaries. Furthermore, partial volume effects as well as Gibbs ringing artifacts are reduced owing to the constraint iterative reconstruction. Consequently, those images represent the real PCr distribution better than conventionally reconstructed images. In order to achieve signal-effective 31P acquisitions, the contrasts of the point-reflected bSSFP sequence were summed up. Due to PCr relaxation times in the order of seconds, the contrasts of readouts RO1 and RO2 differ by less than 10% in terms of SNR. Another aspect of this study is that undersampling induces a noise-like behavior in the image domain. Hence, the iterative reconstruction is favored for a radial sampling scheme, which was applied in the measurements.

Conclusion

In this work, 31P/1H images of the human brain were examined applying a 3D radially-sampled and density-adapted bSSFP sequence in combination with different reconstruction algorithms. The iterative reconstruction is appropriate for mapping regions where sharp tissue boundaries occur and reduces partial volume effects as well as Gibbs ringing.

Acknowledgements

This work was funded by the Helmholtz Alliance ICEMED - Imaging and Curing Environmental Metabolic Diseases, through the Initiative and Networking Fund of the Helmholtz Association.

References

[1] Parasoglou P, Xia D, Chang G, Regatte RR. 3D-mapping of phosphocreatine concentration in the human calf muscle at 7 T: Comparison to 3 T: Imaging of Phosphocreatine in the Human Calf Muscle at 3 T and 7 T. Magn. Reson. Med. 2013;70:1619–1625. doi: 10.1002/mrm.24616.
[2] Ajraoui S, Parra-Robles J, Wild JM. Incorporation of prior knowledge in compressed sensing for faster acquisition of hyperpolarized gas images. Magn. Reson. Med. 2013;69:360–369. doi: 10.1002/mrm.24252.
[3] Rink K, Berger MC, Korzowski A, Breithaupt M, Biller A, Bachert P, Nagel AM. Nuclear–Overhauser–enhanced MR imaging of 31P–containing metabolites: multipoint–Dixon vs. frequency–selective excitation. Magn. Reson. Imaging 2015 [Epub ahead of print]. doi: 10.1016/j.mri.2015.07.017.
[4] Nagel AM, Laun FB, Weber M-A, Matthies C, Semmler W, Schad LR. Sodium MRI using a density-adapted 3D radial acquisition technique. Magn. Reson. Med. 2009;62:1565–1573. doi: 10.1002/mrm.22157.
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[6] Gnahm C, Bock M, Bachert P, Semmler W, Behl NGR, Nagel AM. Iterative 3D projection reconstruction of 23Na data with an 1H MRI constraint. Magn. Reson. Med. 2014;71:1720–1732. doi: 10.1002/mrm.24827.

Figures

Fig. 1: Scheme of the 3D radially-sampled and density-adapted 31P bSSFP sequence composed of two point-reflected gradients to acquire several contrasts.

Fig. 2: Conceptual workflow to obtain iteratively reconstructed 31P images:
(A) Contrasts of 31P acquisitions.
(B) Gridding-reconstructed and correlated 31P image.
(C) Gridding-reconstructed and oversampled 31P image.
(D) 1H FLASH acquisition employed as anatomical reference and registered on the oversampled 31P image.
(E) Binary mask utilized as prior knowledge.
(F) Iteratively reconstructed 31P image with 1H MRI constraint.

Fig. 3: Transversal slices of the head from a healthy volunteer. Anatomical information is represented by a 1H FLASH image. In the overlay, the PCr images are superimposed in colorscale:
(A) Gridding-reconstructed 31P image.
(B) Gridding-reconstructed 31P image combined with a Hamming filter.
(C) Iteratively reconstructed 31P image.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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