João Jorge1,2, Frédéric Grouiller3, Patricia Cotič4, Wietske van der Zwaag5, Patrícia Figueiredo2, and Rolf Gruetter1,6,7
1École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland, 2ISR-Lisboa/LARSyS/Department of Bioengineering, Instituto Superior Técnico, Lisbon, Portugal, 3Biomedical Imaging Research Center, University of Geneva, Geneva, Switzerland, 4Institute of Mathematics, Physics and Mechanics, Ljubljana, Slovenia, 5Spinoza Centre for Neuroimaging, Amsterdam, Netherlands, 6Department of Radiology, University of Lausanne, Lausanne, Switzerland, 7Department of Radiology, University of Geneva, Geneva, Switzerland
Synopsis
The
enhanced BOLD sensitivity available at 7T can bring significant advantages for EEG-fMRI
studies, and the use of accelerated fMRI sequences such as SMS-EPI could further
boost sensitivity. This work investigated whether SMS-EPI can be safely
acquired with EEG at 7T, and whether the resulting sensitivity is favorable for
combined EEG-fMRI approaches. The adopted SMS-EPI sequence (1.8mm isotropic
resolution, whole-brain, TRvol=1.57s) produced no temperature
increases when combined with EEG. In a human, eyes-open/closed and resting-state
activity patterns could be robustly detected in both modalites, and EEG-derived
timecourses produced consistent BOLD predictions, even at a single-subject
level with minimal spatial smoothing.Purpose
The
increased magnetization and BOLD sensitivity available at 7T can bring important
benefits for simultaneous EEG-fMRI approaches, such as when studying the role
of finer brain structures or subject-specific features
1. The
increased SNR facilitates the use of accelerated fMRI sequences, one prime
example being simultaneous multi-slice (SMS) EPI, in which multiple 2D slices
are acquired together in each excitation. Recent developments have brought
SMS-EPI to an excellent trade-off between temporal resolution and image quality
2,
and its application to EEG-fMRI could prove highly valuable. Nevertheless, a
number of technical issues must be addressed. First, the RF pulses used to
excite multiple slices may compromise subject safety due to interactions with
EEG wires
3. Second, accelerated sequences carry compromises in image
SNR, which may aggravate the degradation effects already caused by EEG
components
4, and overall potentially reduce functional sensitivity
to levels unsuitable for EEG-fMRI applications. This work investigates both
issues with EEG-fMRI at 7T using SMS-EPI: first, temperature measurements were conducted on a phantom during
simultaneous acquisitions, for safety assessment; subsequently,
simultaneous acquisitions were performed on a human volunteer, during resting-state
and an eyes-open/closed paradigm. The functional sensitivity of each modality,
and their integration, was investigated at the single-subject level.
Methods
Acquisition setup: acquisitions were performed on a 7T head scanner (Siemens),
equipped with an 8ch Tx/Rx head RF array (Rapid Biomedical); the 8 elements of
the array were arranged in a single cylindrical row surrounding the head (Fig.1a).
EEG data were recorded using a 64ch cap (EasyCap) connected to two BrainAmp MR
amplifiers (Brain Products) in an optimized setup5.
SMS-EPI protocol: to best exploit the head array sensitivity profiles, SMS-EPI was
acquired in sagittal slices, with 2× acceleration (with CAIPI factor=2), and AP
phase encoding (with 2× GRAPPA). Other acquisition parameters: whole-brain FOV=140mm(LR)×187mm(AP)×216mm(HF),
res=1.8mm isotropic, 78 slices, partial Fourier=7/8, TRvol/TE=1572/25ms.
Temperature measurements: temperature was monitored with 4 fiber optic sensors (Neoptix)
placed on a phantom during EEG-fMRI acquisition, for 2 successive runs: 10min of
SMS-EPI, followed by 10min of standard EPI (comparable parameters, with 30
slices, 160% inter-slice gaps).
Human study: for the resting-state paradigm (10min), the subject lied awake
fixating a red cross; the eyes-open/closed paradigm comprised eight blocks of
15s eyes-open and 15s eyes-closed, mediated by auditory cues.
Post-acquisition, EEG data were preprocessed to reduce gradient and pulse
artifacts via average artifact subtraction, and ICA-decomposed to identify
components with relevant power fluctuations in the alpha-band. FMRI data were
motion-corrected and lightly smoothed (FWHM=2mm). The eyes-open/closed run was analyzed
with a GLM approach using the task paradigm as regressor of interest. The
resting-state data were either ICA-decomposed to search for typical resting-state
networks (RSNs), or underwent GLM analysis using an EEG-derived alpha-power
timecourse as regressor of interest.
Results
Based
on pilot acquisitions, an SMS acceleration factor of 2 introduced no
discernible artifacts compared to non-accelerated data; subtle artifacts could
be found using a factor of 3, and considerable degradation ensued with higher
factors (Fig.1b). A factor of 2 was selected for this study to assure minimal
slice cross-talk effects. Temperature measurements during the 20min session showed
no safety concerns, with overall increases below 0.6°C in the measured
electrodes, and of 5.2°C on the EEG amplifiers (Fig.2). Strong responses to the
eyes-open/closed paradigm could be found in both EEG and fMRI data;
ICA-decomposed EEG revealed several components with anterior-posterior dipolar
topology and strong alpha power increases during eyes-closed periods (Fig.3a);
GLM analysis of the fMRI data revealed significant signal changes (|Z|>2.5) for
eyes-closed vs. open periods in visual cortical regions (Fig.3b). For the
resting-state experiment, ICA decomposition of the fMRI data yielded several
well-known RSNs including visual areas, auditory and somatosensory areas, and
the default mode network (Fig.4a). From the EEG data, three independent
components displayed a pronounced peak in the alpha band (close to 11Hz for
this subject) (Fig.4b). Two of these components yielded alpha power timecourses
that proved to be meaningful predictors of BOLD fluctuations in visual cortical
areas (Fig.4c); moreover, these two visual regions closely matched two of the
fMRI RSNs previously identified with ICA (IC15 and IC16 in Fig.4a).
Conclusion
We present the first report on EEG-fMRI at 7T using SMS-EPI. The
adopted sequence raised no safety concerns when
combined with EEG recordings. From human data, eyes-open/closed and resting-state
activity patterns could be robustly detected in both EEG and fMRI, and
EEG-derived timecourses produced consistent predictions in the BOLD data, even
at a single-subject level with minimal spatial smoothing (2mm). These results indicate
that SMS-EPI may be a highly advantageous choice for fMRI acquisition with
concurrent EEG at ultra-high fields.
Acknowledgements
This
work was supported by Centre d'Imagerie BioMédicale (CIBM) of the UNIL, UNIGE,
HUG, CHUV, EPFL and the Leenaards and Jeantet Foundations, and by the
Portuguese Science Foundation (FCT) through grants PTDC/EEI-ELC/3246/2012 and
PEst-OE/EEI/LA0009/2013.References
(1)
Grouiller et al., Proc. ISMRM 2015. (2) Setsompop et al., MRM 2012. (3) Lemieux
et al., MRM 1997. (4) Mullinger et al., I.J.Psycho 2008. (5) Jorge et al.,
NeuroImage 2015.