Clarissa Zimmerman Cooley1, Melissa Haskell1,2, Jason P Stockmann1, Cristen Lapierre1, Chenoa Schatzki-McClain1, Charlotte Sappo1, Stephen F Cauley1,3, Bastien Guerin1,3, Matthew S Rosen1,3,4, and Lawrence L Wald1,3,5
1A. A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, United States, 2Biophysics, Harvard University, Cambridge, MA, United States, 3Harvard Medical School, Boston, MA, United States, 4Department of Physics, Harvard University, Cambridge, MA, United States, 5Harvard-MIT Division of Health Sciences Technology, Cambridge, MA, United States
Synopsis
The development of a low-cost portable
MRI scanner for brain imaging could address the need for imaging at unconventional
sites. We previously presented an appropriate method for 3D imaging in a
portable magnet without gradient coils. In-plane image encoding was demonstrated
using the natural field variation of a rotating prototype magnet. However, the
magnet diameter must be increased for human brain imaging and the built-in encoding
field should be tailored to improve image resolution uniformity. We present a
method for designing an optimized magnet for this application using the Genetic
Algorithm, and evaluate a chosen design via image simulations. Purpose
To
design a head-size permanent magnet with built-in Spatial Encoding Magnetic
fields (SEM) to support a portable brain imaging system without gradient coils.
Methods
3D MR imaging has been shown in a
portable rotating Halbach cylinder magnet1,
where generalized projection imaging is performed in the y-z plane using the magnet’s “natural” B0 variation as
an encoding field (SEM)2
and encoding along x is done with Transmit
Array Spatial Encoding (TRASE)3. y-z plane resolution depends on
the local gradient of the SEM which ideally contains relatively high 1st
order fields because blurring results from low-gradient regions of higher order
fields4. TRASE requires a
spin-echo train of accurate refocusing pulses, which are difficult to achieve
over a wide B0 bandwidth (includes built-in SEM)5. Additionally, RF coil quality factors (Q) must be low
for wide B0 bandwidths, compromising the coil efficiency. Therefore,
the ideal SEM is a tradeoff between resolution and bandwidth. We aim to design
a magnet with a large enough bore for human brain imaging, a low B0 bandwidth,
and a 1st order field term (specifically X0Y1Z0)
that provides at least 2mm in-plane resolution
for our standard readout time (6.4ms with SW = 20KHz).
Possible magnet designs are a subset of
a full Halbach cylinder model with 3 layers (diameters = 32cm, 41cm, and 50cm) and
24 rungs made up of 1” NdFeB cubes in 18 rows (Figure 1). The magnet bore is
smaller than shoulder-width therefore only 7 magnet rows are possible below
isocenter (assuming 18cm between shoulders and brain center), so the model
includes a 1-row “neck layer” (layer 1) to boost the inferior field. Magnet
designs are represented by a vector, X, containing
magnet indicator values (0,1, or 2) for each cube location, where 0 indicates
air, 1 indicates a grade N42 magnet (Br = 1.32T), and 2 indicates a grade N48
magnet (Br = 1.42T).
We aim to optimize the field in a 20cm DSV
at isocenter. The field contribution from each possible cube locations was
simulated with Comsol Multiphysics and fit to 6th order polynomials.
The field from an arbitrary magnet design is calculated by summing across the
appropriate fields specified by the design vector X. MATLAB’s Genetic Algorithm was used to create a high quality
population of X vectors that satisfy
2 non-linear constraints: 1) average field > 70mT, 2) X0Y1Z0 coefficient
>3.67mT/m. The “fitness” of candidate
magnet designs are evaluated by an objective function that removes the X0Y1Z0
field component and outputs the residual
resonant frequency range (i.e. minimizes field variation beyond the in-plane first-order
term). The algorithm uses the fitness values to determine the next “generation”,
and terminates when the best fitness value stops improving in subsequent
generations.
Results
Figure 2A shows an example run of the algorithm, and Figure
2B shows properties of resulting solutions from 500 runs of the algorithm. The
color indicates the strength of the linear field component. Designs closest to
the upper left corner are best because they have high average field strengths
(higher SNR) and lower non-linear field variation. Figure 2C shows the same
solutions plotted as a function of total field variation (including linear
term).
The chosen magnet design
solution, indicated in Figure 2B and 2C, has an average field of 74mT (3.15
MHz), a range of 2mT (86 KHz) over the target volume, and a X
0Y
1Z
0
coefficient of 4.9mT/m. Figure 3A-B shows the SEM of the non-optimal prototype magnet
and the simulated SEM of the optimized magnet. Simulated images using these SEMs
are shown in Figure 3C-D, and 1D simulated images of point sources are shown in
Figure 4A. Figure 4B shows the width of the resulting point spread functions. Figure
5A shows a drawing of the magnet cube positions (N42=grey, N48=blue). Figure
5B shows a rendering of the planned magnet housing, 32-element receiver-coil array,
and head-support piece. The estimated weight of the NdFeB material in this
design is 72kg.
Discussion
Imperfections
in the NdFeB cubes will cause the constructed magnet’s field to differ from the
simulation. For this reason, the magnet housing includes trays that can be
populated with shim magnets. After construction, the magnetic field will be
mapped and a variation of the described method will be used to place shim
magnets.
Conclusion
We have presented a method and resulting design
of a lightweight magnet for brain imaging with a built-in SEM. Compared to our
previous prototype, this magnet design promises a larger bore, improved
resolution, and a total field range that maintains reasonable coil efficiency
and transmit bandwidths.
Acknowledgements
The authors thank Elfar
Adalsteinsson and Matthieu Sarracanie. Support by NIH R01EB018976, NIH T90DA022759/R90DA023427.References
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