Brain tissue pulsatility measured at 7T with high resolution and whole brain coverage
Ayodeji L. Adams1, Peter R. Luijten1, and Jaco J.M. Zwanenburg1

1Radiology, University Medical Center Utrecht, Utrecht, Netherlands

Synopsis

Pulsatile brain tissue motion, driven by the cardiac cycle, is important for maintaining homeostatic processes in the brain, and increased pulsatility is linked to diseases such as dementia. In this study, we demonstrate the feasibility of measuring whole brain volumetric strain with 2 mm isotropic resolution at 7T MRI in 8 healthy volunteers. Maximum volumetric strain was (2.3 ± 1.5) x 10-3, and showed considerable inter-subject and inter-slice variability that was much larger than could be explained from intrinsic measurement errors as assessed from a gel phantom. This method has potential for studying the brain pulsatility in disease.

Background

The brain has pulsatile motion driven by the cardiac cycle. This pulsatility is important for maintaining homeostatic processes within the brain. An increase in pulsatility has been linked to diseases such as dementia, making it potentially useful for gaining insight into these diseases1. Determining brain pulsatility is difficult due to the time durations required to measure time-resolved low tissue velocities over a large volume. Feasibility of volumetric strain rate mapping2 and whole brain strain rate mapping3 was previously shown at 1.5T but not yet at 7T. At 7T, single slice tissue velocity maps showed a potential gain in SNR by a factor of 5 compared to 1.5T4. In this study, we demonstrate the feasibility of measuring whole brain volumetric strain with high resolution at 7T MRI in 8 healthy volunteers.

Method

Retrospectively gated, 4D phase contrast imaging was done on eight healthy volunteers (5 males, 25.3 ± 5.0 years) with a 7T MR system (Phillips Healthcare) using the sequence parameters indicated in Table 1. A phantom (head shaped, 4-5% agarose gel) was also scanned using the same parameters. For each data set, the mean velocity over the cardiac cycle was subtracted from the velocity measurements. The built-in MATLAB (V2015b MathWorks®) divergence function was used to find the divergence of the velocity field ($$$\triangledown \cdot V = \frac{\partial V_{x}}{\partial x} + \frac{\partial V_{y}}{\partial y} + \frac{\partial V_{z}}{\partial z}$$$), which was computed to determine the strain rate. Strain in the brain over the cardiac cycle was calculated by integrating the strain rate after a 2D-median filter (kernel size: 2x2 pixels) was applied to smooth the data in the transverse plane. Large ROIs (avoiding areas with high flow from CSF or blood) were drawn in 3 slices (low, middle and top of the brain) to determine the mean strain curve. The brain was considered to be fully relaxed when the strain was minimum (end diastole) so the minimum mean strain was set to zero. Two consecutive scans (separated by a 1 minute T1 scan) were also taken in an additional volunteer to compare the spatial heterogeneity of the strain maps.

Results

Figure 1 shows a representative example of the magnitude and 3D low-velocity images. Figure 2 shows the brain tissue strain for low, middle and high slices over the cardiac cycle for all volunteers. The corresponding mean maximum strain values over all volunteers and for the phantom are shown in Table 2. The minimum strain for all volunteers and slices was found to occur during 68-82% of the cardiac cycle (relative to the peak in the pulse-oximeter signal). The apparent spatial heterogeneity was not found to be reproducible in two consecutive intra-subject strain measurements, though the strain curves were very similar (Fig. 3).

Discussion

The general shape of the mean brain tissue volumetric strain curves from this investigation show agreement with plots reported in the study of Hirsch et al.2 However, our strain values were in general an order of magnitude greater than theirs (2.3 x 10-3 versus 2.8 x 10-4). This difference may have resulted from differences in image acquisition and post-processing, but requires further investigation. The minimum for all slices and volunteers occurred typically near the end of the cardiac cycle, suggesting consistent relaxation of the brain during the final stages of diastole. However, the time of the peak strain appeared to be more variable between subjects. Also the maximum strain amplitudes were very variable between subjects, and even between slices of the same volunteer. It is very unlikely that the inherent noise or systematic errors within the MR acquisition could account for these heterogeneous results since the phantom measurements showed no clear spatial or temporal patterns and yielded 10 times lower strain magnitudes than the volunteer measurements. The intra-subject spatial heterogeneity seems not to be reproducible, which suggests that local brain tissue strain may vary quasi-randomly over time. However, further research in more subjects is needed to further characterise the observed intra- and inter-subject heterogeneity.

Conclusion

We showed in this study the feasibility of measuring and quantifying volumetric strain at 7T with whole brain coverage and high (2mm isotropic) resolution, without excessive smoothing in the analysis. The method may have potential for studying the physiology of brain pulsatility in healthy conditions and disease.

Acknowledgements

This work was supported by the European Research Council, ERC grant agreement n°337333.

References

1. Wagshul M, Eide P, & Madsen J. The pulsating brain: A review of experimental and clinical studies of intracranial pulsatility. Fluids and Barriers of the CNS. 2011; 8(1), 5.

2. Hirsch S, Klatt D, Freimann F, Scheel M, Braun J, & Sack I. In vivo measurement of volumetric strain in the human brain induced by arterial pulsation and harmonic waves. Magnetic Resonance in Medicine. 2013; 70(3): 671–682.

3. Noorman N, Hirsch S, Braun J, Luijten P.R, Sack I, & Zwanenburg J.J.M. 4D Phase Contrast EPI for assessing 3D volumetric strain rate in the human brain over the cardiac cycle [abstract] In: ISMRM 23rd Annual Meeting & Exhibition. 2015 May 30 – June 5. Toronto, Canada

4. Noorman N, Visser F, Luijten P.R, & Zwanenburg J.J.M. Comparing 1.5T vs. 7T phase contrast MRI for measuring brain tissue pulsation [abstract] In: ISMRM 23rd Annual Meeting & Exhibition. 2015 May 30 – June 5. Toronto, Canada

Figures

Figure 1. Typical 7T magnitude and velocity data of a mid-brain slice for a single volunteer at systole. The displayed velocity maps were not smoothed and were acquired with an isotropic resolution of 2x2x2 mm3. The dominant positive Feet-Head velocity at systole was a characteristic feature of all acquired datasets.

Figure 2. The strain over the cardiac cycle for high (A), middle (B) and (C) low slices of the brain for all volunteers. The mean strain of all volunteers and phantom measurements (acquired during a simulated physiological signal of 70 beats per minute) are plotted in D.

Figure 3. A Strain map, curve and magnitude image of a mid-brain slice near systole showing apparent spatial heterogeneity ‘blobs’ and B, the same slice and volunteer at the same time point for a scan taken one minute later. C The same acquisition and post-processing steps performed on the phantom.

Table 1. MR sequence parameters used in the study. Each velocity direction (Right-Left, Anterior-Posterior, Feet-Head) was acquired separately.

Table 2. Maximum and minimum mean strain rate and strain values averaged over all slices and volunteers. The maximum and minimum mean strain for the phantom measurements are also shown. The brain volume was to considered to be only expanding from rest and thus minimum strain is set to zero.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
3297