John Grinstead1, Valerie Anderson2, Manoj Sammi2, and William Rooney2
1Siemens Healthcare, Portland, OR, United States, 2Oregon Health & Science University, Portland, OR, United States
Synopsis
Parametric T1
mapping using inversion recovery has competing requirements for speed, SNR, spatial
resolution, anatomical coverage, and adequate sampling of the longitudinal
magnetization recovery. Potential sources
of slice-to-slice variability in quantitative T1 maps are investigated, including slice cross talk due to imperfect slice profiles, and the range of TIs used to
fit each slice. It is demonstrated that T1 relaxometry benefits
significantly from slice acceleration techniques in not only scan time &
slice coverage, but in its ability to reduce quantitative errors by allowing
the same TI sampling across all slices. Introduction
Slice-accelerated
(SliceAcc) multi-slice techniques (i.e. “multiband”) utilize RF pulses which
excite multiple 2D slices simultaneously [1-4]. As all of k-space is measured,
SliceAcc has the benefit of acquiring more slices per unit time without the usual
SNR penalty. One use of SliceAcc is high spatial resolution EPI applications where
the minimum TR would otherwise be higher than needed (i.e. high-resolution fMRI
or DTI), allowing shorter scan time. Another use is high temporal resolution EPI
where the maximum number of slices per TR would otherwise be lower than desired
(i.e. resting state fMRI or DSC perfusion).
Parametric T1 mapping using inversion
recovery (IR) has competing requirements for speed, SNR, spatial resolution,
anatomical coverage, and adequate sampling of the longitudinal magnetization
recovery. One approach involves a non-selective IR pulse followed by 2D
multi-slice echo-planar imaging (EPI), which is repeated with the EPI slice
acquisition order permuted each time such that each slice experiences a
different effective TI within each repetition [5,6] (here called shuffled-IR-EPI). Previous work described the application of SliceAcc to
quantitative T1 mapping, providing increased slices and/or TI points
acquired in a given measurement time [6-7]. Here, we highlight new aspects in which
SliceAcc is beneficial for high spatial resolution applications at 7T.
Methods
Slice-accelerated shuffled-IR-EPI
was implemented as previously described [10]. A non-selective IR pulse inverts
the magnetization, and is followed by the SliceAcc EPI imaging kernel which is
repeated NTI times. An optional recovery period (Trelax)
can be used before another IR pulse is applied. The slice ordering is permuted for
each repetition to change the effective TI for each slice. The updated implementation
permitted NTI <= (Nslice/SliceAcc), where Nslice
is the total number of slices, and SliceAcc is the slice acceleration factor. When,
NTI < Nslice, the TIs are distributed evenly throughout the IR for each
slice, but the TIs are slightly shifted for adjacent slice groups.
Potential sources
of slice-to-slice variability were investigated, including slice cross talk due
to imperfect slice profiles, and the range of TIs used to fit each slice. To
investigate the effect of the range of TIs on the parametric maps and to
differentiate it from slice cross talk effects, a dataset with NTI =
(Nslice/SliceAcc) was fit with different subsets of TIs as would occur if NTI=0.5*Nslice/SliceAcc,
and the resulting T1 values were compared to the fully sampled case. To
investigate the effect of slice cross talk, T1 maps were compared for protocols
with Trelax=2sec and Trelax=0. In the case of Trelax>0, the effective TR for
the first slice interleave equals TR, while the effective TR for the second
slice interleave (for any portion of the slice that was excited by the other
interleave due to imperfect slice profiles) is (TR-Trelax)/2.
Measurements
were performed on a Siemens MAGNETOM 7T using a Nova Medical 24-channel head
coil. The protocols used were: TE/TR=24/5000-7000ms, Trelax=0-2sec, (1.2mm)3
voxels, GRAPPA=3, SliceAcc=2, 102 slices, NTI=25 & 51, TI 32-5000ms, interleaved
slice ordering, scan time 4:14-6:00. The series of magnitude images were fit voxel-wise
to the 3-parameter model S(TI) = M0*|1-A*exp(-TI/T1)|, for
maps of T1, M0, and A, where A=2 in the case of ideal
inversion.
Results and Conclusion
T1 differences of 5-10% were
seen between adjacent slices when the range of TIs were not identical, even
though they only differed by ~100ms. This is seen in the multiplanar
reformatted images in Figure 1. The signal differences were reduced when Trelax=0, indicating a small amount of slice cross talk effects. However,
the T1 differences were still evident. When both Trelax=0 and the TI range were
the same for all slices, these differences were no longer significant (Figure 2).
Slice-to-slice variations were also seen when the dataset in Figure 2 was
subsampled to simulate the data in Figure 1, to demonstrate it was not purely an
SNR issue.
Slice acceleration
improves imaging efficiency for protocols with thin slices (i.e. Nslice>80), by
allowing thin slices without longer TRs and longer scan time. It can also be
used as an alternative way to reduce the number of repetitions (slice
permutations) needed to provide the same TI range to all slices, thereby
reducing scan time. Although this can introduce dead time between slices if the
TR is not reduced, it avoids slice-to-slice variations in the T1 maps.
In conclusion, we demonstrated that T1
relaxometry benefits significantly from SliceAcc in not only scan time and slice coverage, but in its ability to reduce quantitative errors by allowing
the same TI sampling across all slices.
Acknowledgements
No acknowledgement found.References
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45:630-634 (2001). [6] Grinstead, Proc.
ISMRM 22:3215 (2014). [7] Dougherty OHBM2014, 2002.