Echo-Shift wave-CAIPI with Simultaneous MultiSlice imaging for rapid susceptibility weighted FLASH
Huihui Ye1,2, Berkin Bilgic1, Stephen Cauley1, Borjan Gagoski3, Jianghui Zhong2, Yiping Du2, Lawrence L. Wald1, and Kawin Setsompop1

1MGH/A.A. Martinos Center for Biomedical Imaging, Charlestown, MA, United States, 2Zhejiang University, Hangzhou, China, People's Republic of, 3Boston Children's Hospital, Charlestown, MA, United States

Synopsis

Susceptibility weighted FLASH imaging provides exquisite soft tissue contrast at high spatial resolution and low distortion, but at a cost of lengthy acquisition time. In this work, we developed a highly efficient Echo-Shift wave-CAIPI technique and demonstrated its ability to provide 18-fold acceleration for FLASH acquisitions with minimal noise and artifact penalties. Instead of conventional single slice or slab echo-shift, we propose an echo-shift Simultaneous MultiSlice method to enable improved controlled aliasing and desirable volumetric noise averaging while avoiding slab edge artifacts. With this technique, we demonstrated high-quality 1.5 mm isotropic whole-brain susceptibility weighted FLASH at 3T and 7T in 36s.

Purpose

The presence of susceptibility shifts gives rise to a phase shift of the excited magnetization which evolves linearly with time. Thus acquisitions at long TE(at ~T2*) are desirable for SWI and QSM. If TR is kept >TE this leads to lengthy acquisition times. Echo-shift(ES) FLASH1,2 , which efficiently interleaves 2D slice or slab acquisitions and shifts the echo into the next TR period allows TR<TE and improves efficiency. ES has also been used for other T2* weighted acquisitions such as fMRI(e.g. PRESTO)3, and later combined with Simultaneous MultiSlice(SMS)4 for further acceleration. We previously proposed improving parallel imaging in FLASH using the Wave-CAIPI trajectory5 which can provide an order of magnitude acceleration in 3D FLASH acquisition with minimal g-factor and image artifact penalties. Wave-CAIPI uses an innovative controlled aliasing scheme which takes full advantage of the available coil sensitivity information in multi-channel receiver arrays. In this work, we combine the ES and wave-CAIPI method, to provide high quality susceptibility weighted FLASH acquisitions up to 18x faster than unaccelerated, non-echoshifted acquisitions. To achieve better performance, we utilize echo-shift SMS with wave-CAIPI which enables desirable volumetric noise averaging and optimal controlled aliasing performance while avoiding slice profile boundary artifacts in ES multi-slab acquisition2. Using ES wave-CAIPI, we demonstrate high quality whole-brain susceptibility weighted gradient echo acquisition at 3T and 7T with 1.5mm isotropic voxel size in 36s.

Methods

Fig 1 shows the ES-SMS FLASH sequence with echo shift gradients applied on both Gx and Gz gradients, wherein the ES factor is 2 and MB-48 excitation RF pulses with 1.5mm slice thickness are used. In this sequence, the first RF excites the odd slices of the 3D imaging volume with the signal readout echo-shifted to the second TR, while the second RF excites the even slices with the signal readout shifted to the third TR. The use of ES-SMS enables a comb of slices to be acquired simultaneously, which enables desirable volumetric noise averaging while avoids slice edge issues of ES multi-slab acquisitions. Moreover, the combined use of ES-SMS with accelerated Wave-CAIPI acquisition enables controlled aliasing to be performed across the whole imaging FOV rather than a partial FOV in the slice-direction; thereby providing optimal parallel imaging performance to achieve low noise amplification and image artifact penalties. To investigate the performance of the slice profile in ES wave-CAIPI, Bloch simulation was used to calculate the steady-state signal of the acquisition, where the effect of both the interleave MB RF pulses and echo-shift gradients were accounted for (through summing up the signal across multiple sub-voxel positions along x to obtain the slice profile signal at a given z position). A healthy subject was scanned with informed consent at 3T and 7T with 32 channel head array to acquire ES wave-CAIPI FLASH data. Imaging parameters were FOV 220x220x144mm and 1.5mm3 iso resolution, RyxRzxES=3x3x2, BW=90Hz/px, RF duration=5ms, TBW=4, FA=10o, TReff/TEeff=47/35ms, Tacq=36s. After the acquisition, two echo-shifted volumes were reconstructed separately using standard wave-CAIPI reconstruction5 and concatenated in an interleaved fashion to generate full volumetric data. The resulting volumetric phase images were then processed with 2D harmonic filtering to the remove the background phase component6, and dipole inversion with Total Generalized Variation (TGV) regularization7 was applied to estimate the underlying susceptibility distribution.

Results

Fig 2 shows the simulated slice profiles for acquisition with and without echo shift demonstrating no cross-talk and minimal slice profile change resulting from the echo-shifting. Fig 3 shows the high quality magnitude, tissue phase and susceptibility images obtained from the ES wave-CAIPI data at 1.5mm isotropic resolution in 36s, with high SNR, low artifact and image distortion. At RyxRz=3x3 acceleration, wave-CAIPI has previously been demonstrated to result in very low noise amplification with g-factor of close to one2 and ES acceleration does not incur a noise amplification penalty. Furthermore, with adequately large echo shift gradients, no signal leakage and/or image strip artifacts across slices were observed.

Discussions & Conclusions:

Echo shift method has been effectively incorporated into the wave-CAIPI sequence to attain rapid, high quality susceptibility mapping at 3T and 7T. This acquisition employed the ES-SMS method to provide high SNR, good slice-profile and optimal controlled aliasing. A relatively high MB factor of 48 is used, where VERSE’ing8 was not needed due to the low FA used. Further acquisition acceleration of up to and beyond 30x will be feasible with the use of higher ES factors such as 3-4. This can be achieved through the use of higher BW readout and/or longer TE acquisitions (which are more suitable for e.g. 3T MRI with longer T2*).

Acknowledgements

This work has been supported through the NIH NIBIB grants R01EB017219, R00EB012107, R01EB017337and P41EB015896.

References

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2. Ma Y-J, Liu W, Zhao X, et al. 3D interslab echo-shifted FLASH sequence for susceptibility weighted imaging. Magn Reson Med. 2015;0(0):0.

3. Liu G, Sobering G, Duyn JH, Moonen CTW. A functional MRI technique combining principles of echo-shifting with a train of observations(PRESTO). Magn Reson Med. 1993;30:764-768.

4. Boyacioglu R, Schulz J, Norris D. Multiband Echo Shifted EPI. In: Proc Intl Soc Mag Reson Med_SMS Workshop. ; 2015.

5. Bilgic B, Gagoski BA, Cauley SF, et al. Wave-CAIPI for highly accelerated 3D imaging. Magn Reson Med. 2014;00(May):1-11. doi:10.1002/mrm.25347.

6. Kaaouana T, de Rochefort L, Samaille T, et al. 2D harmonic filtering of MR phase images in multicenter clinical setting: Toward a magnetic signature of cerebral microbleeds. Neuroimage. 2014;104:287-300. doi:10.1016/j.neuroimage.2014.08.024.

7. Bilgic B, Chatnuntawech I, Langkammer C, Setsompop K. Sparse methods for Quantitative Susceptibility Mapping. Proc SPIE. 2015;9597:959711. doi:10.1117/12.2188535.

8. Conolly S, Nishimura DG, Macovski A, Glover GH. Variable-rate selective excitation. J Magn Reson. 1988;78(3):440-458.

Figures

Echo shift wave-CAIPI sequence diagram

Simulated slice profile with and without echo shift

Magnitude, phase and susceptibility maps with ES wave-CAIPI at 3T/7T



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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