Increasing Temporal Resolultion of DSC-perfusion MRI using 3D Distributed Spirals and Through-Time GRAPPA
Dallas C Turley1 and James G Pipe1

1Neuroimaging Research, Barrow Neurological Institute, Phoenix, AZ, United States

Synopsis

DSC-MRI requires high temporal resolution to accurately measure perfusion parameters in vivo. Using GRAPPA parallel imaging, it is possible to achieve whole-brain coverage while maintaining high temporal sampling. The proposed method combines a 3D dual echo spiral sequence with through-time GRAPPA for whole-brain coverage with < 1 second temporal resolution.

Introduction

Dynamic susceptibility contrast MRI (DSC-MRI) is a highly valuable tool for investigating cancer, stroke and traumatic injury. Many studies have shown the need for fast temporal sampling (< 2 seconds) to accurately measure the passage of a contrast agent bolus [1]. The purpose of this study is to combine 3D spiral-based acquisition strategies with GRAPPA parallel imaging to increase the temporal resolution of DSC-MRI.

Methods

The Distributed Spirals k-space trajectory (DS) is shown in Figure 1 [2]. A cross-section of the volume in the kz-kr direction shows a uniform sampling pattern which is used to interpolate missing data using GRAPPA [3]. The proposed method is a modification of the method presented in [4], which uses fully sampled data sets through time to calibrate GRAPPA weights for individually undersampled segments of the trajectory.

The fully sampled volume is segmented into 4 bins with interleaved trajectories (ABCD), each bin supporting one fourth the fully sampled field of view. During dynamic data acquisition, the four bins are acquired sequentially, (ABCDABCD, etc); each acquired bin can be used to interpolate missing data for the other 3 bins, creating a fully sampled volume at each time point. As the proposed method acquires bins sequentially, sliding window and GRAPPA reconstructions can be performed on the same data set.

A perfusion phantom was constructed following the method presented in [5]. The rate and amount of contrast agent injection was controlled using a power injector. Data were collected on a 3T Philips Ingenia scanner. Acquiring a single bin took 1.0 seconds; a total of 250 bins were collected. Segmenting the k-space trajectory and calculating GRAPPA weights is performed once, requiring 2.7 minutes on a 32 core, Intel Xeon 3.1GHz processor. Applying GRAPPA weights to undersampled data requires 1.8 seconds, and is performed on each undersampled bin. Data were reconstructed using sliding window, zero-filling unacquired data, and the proposed method.

Results & Conclusions:

As shown in Figure 2, the GRAPPA reconstruction reduces aliasing artifacts when compared to the zero-filled image. Due to the nature of the DS trajectory, aliasing is less evident than for (e.g.) Cartesian k-space trajectories. Temporal blurring caused by a sliding window reconstruction is evident in the signal time course for the measured arterial input function (Fig 2A), which causes an artificial widening of the signal time course. The proposed method is a promising method for increasing temporal resolution for 3D DSC-MRI perfusion studies.

Acknowledgements

This work was supported by Philips Healthcare.

References

1. Calamante, Prog Nucl Magn Reson Spectrosc. 2013; 74:1-32.

2. Turley. MRM. 2013; 70:413-419.

3. Griswold. MRM. 2002;47:1202-1210.

4. Seiberlich. MRM. 2011; 66: 1682-1688.

5. Kompan. Proc Intl Soc Mag Reson Med. 2015; 0798.

Figures

The 3D k-space trajectory is created by distributing spiral arms along the kz axis and rotating successive arms by the golden angle, sampling a cylinder in k-space (A). The undersampled volume has a highly regular sampling pattern in any radial plane (B). A GRAPPA kernel (blue inset) shows the spatial relationship between source (white) and target (cyan) points for undersampling factor R=4. Applying GRAPPA weights supports the fully-sampled field of view (red inset).

The time course for selected voxels shows the passage of a contrast agent bolus through the phantom for different reconstruction methods. Zero filling unacquried data causes aliasing which appears as periodic noise in the signal time course (arrows). Temporal blurring in the sliding window reconstruction causes a widening of the bolus in the measured AIF (A). As the bolus traverses the phantom (B), the sliding window reconstruction is better able to capture the slower temporal dynamics.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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