Mengye Lyu1,2, Yilong Liu1,2, Victor B. Xie1,2, Yanqiu Feng1,2, Zhe Zhang3, Hua Guo3, and Ed X. Wu1
1Laboratory of Biomedical Imaging and Signal Processing, The University of Hong Kong, Hong Kong SAR, China, People's Republic of, 2Department of Electrical and Electronic Engineering, The University of Hong Kong, Hong Kong SAR, China, People's Republic of, 3Department of Biomedical Engineering, Tsinghua University, Beijing, China, People's Republic of
Synopsis
This work
addresses three problems for in-plane SENSE-accelerated PROPELLER: generally
amplified noise, increased artifact with narrow blades, and degraded motion
correction with wide blades. We show that a novel reconstruction method -
multi-step join-blade (MJB) SENSE can lead to higher SNR and less narrow-blade
artifact than conventional SENSE reconstruction. In addition, k-space
truncation is used to improve the motion correction robustness. We also show
that additional iterations can enhance MJB SENSE. This new method can greatly
benefit future SENSE PROPELLER studies with improved image quality. Introduction
In
PROPELLER, parallel imaging is used mainly in two ways: widening the blades
with fixed echo train length (ETL), or shortening the ETL with fixed blade
width. Wider blades can reduce scan time and potentially benefit motion
correction [1, 2], while shorter ETL [3, 4] can alleviate T2 decay, reduce SAR, and
facilitate T1-w contrast. On the other hand, parallel imaging can enhance noise
and introduce artifacts. Here, we identify and address three major problems in
in-plane SENSE-accelerated PROPELLER: (i) general noise amplification problem,
(ii) ringing artifact with narrow blades, and (iii) degraded motion correction
with wide blades. A novel reconstruction method, multi-step join-blade (MJB)
SENSE, is proposed to reduce noise amplification and narrow-blade artifact. In
MJB SENSE, k-space truncation is used to improve motion correction robustness.
We also show that additional iterations can enhance MJB SENSE.
Methods
MJB SENSE: Conventionally in SENSE PROPELLER [1], blades are separately reconstructed. We denote
this method as simple single-blade (SSB) SENSE. MJB SENSE starts with SSB SENSE, and consists
of three steps as follows (Figure 1).
(1) SSB
SENSE is performed. It provides rough estimations of blade images,
blade-combined images, and motion parameters. To improve robustness, motion estimation [5] is performed after truncating the k-space
of blades in phase encoding directions, such that SENSE artifact is smoothed
and less harmful.
(2) Regularized
single-blade SENSE is performed. It improves the estimations provided by SSB
SENSE. Using the estimated blade-combined images, motion parameters, and the
phases of blade images, we regenerate two sets of blade images, with and
without coil sensitivity map (CSM) weighting. Dividing the CSM-weighted
regenerated blade images by non-CSM-weighted ones, we obtain narrow-blade CSMs.
Each pixel is re-estimated with “back-substitution”, which means when
estimating one pixel, all other pixels are treated known and directly replaced
using the regenerated data.
(3) Joint-blade
SENSE is performed. By patching regenerated high-frequency data, all acquired
blades are widened to have full resolution. Then the blades are registered according
to motion parameters. Thus, for each pixel, all the single-blade SENSE
equations can be combined into a joint-blade SENSE equation. Back-substitution
strategy is also used.
Iterations
can be performed by feeding back the output of step 3 to step 2 to update the
estimation of blade-combined images.
Simulations: PROPELLER data were synthesized
from multi-channel phantom images, which were acquired with matrix size
256-by-256 at 3T using eight-channel coil. Inter-blade in-plane rigid motion was
added with uniform random distribution (±5 degrees rotation and ±5 pixels
translation). Random Gaussian noise was added with SNR level controlled.
In Vivo Experiments: Human brain data were acquired with
fully sampled PROPELLER (3T Philips scanner, eight-channel coil,
TR/TE=4000/111ms, matrix size=436×436,
23 blades×30 lines), on
which retrospective undersampling was performed. The CSMs were computed using
ESPIRIT [6] from the central 24×24
k-space of the fully sampled data.
Results
(1) Motion
correction results in wide-blade simulation (Figure 2) showed that conventional
motion correction was heavily degraded at SENSE factor 6. Motion correction was
largely improved after truncating the blade width to 30.
(2) Noise-free
narrow-blade simulation showed (Figure 3) that, SSB SENSE resulted in ringing
artifact; MJB SENSE did not suffer from such artifact.
(3) Applied
to real brain data (Figure 4), MJB SENSE resulted in obviously less noise than SSB
SENSE. With one more iteration, the image quality was further improved.
Discussion and Conclusion
(1) MJB SENSE reduces noise in in-plane accelerated PROPELLER. MJB SENSE forms joint-blade equations and utilizes blade-combined images such that the blades are jointly reconstructed with mutual regularization. Before, with SSB SENSE, more blades are needed to compensate for SNR loss [1]; now with MJB SENSE, fewer blades are needed so that PROPELLER can be truly accelerated.
(2) MJB SENSE also successfully reduces narrow-blade artifact, because the CSMs are customized for narrow blades in step 2, and the blades are widened in step 3. Reducing narrow-blade artifact holds great significance for in-plane acceleration, because shorter ETL and more flexible contrast are directly facilitated.
(3) SENSE artifact can degrade motion correction. Robust motion correction is crucial to the proposed MJB SENSE method, because motion parameters are used to regenerate data. Our results showed that by truncating the k-space data, robust motion correction can be achieved, leading to successful imaging reconstruction using MJB SENSE.
(4) MJB SENSE is actually applicable to both in-plane accelerated and slice accelerated PROPELLER. Reducing noise is more difficult with in-plane acceleration, because only 2D coil sensitivity can be utilized. In this regard, we use additional iterations to enhance MJB SENSE.
Acknowledgements
No acknowledgement found.References
[1] Chang, Y., et al., Magn Reson Med, 2014.
[2] Skare, S., et al., Magn Reson Med, 2008.
[3] Chuang, T.C., et al., Magn Reson Med,
2006.
[4] Holmes, J.H., et al., Magn Reson Med,
2012.
[5] Pipe, J.G., et al., Magn Reson Med,
2014.
[6] Uecker, M., et al., Magn Reson Med,
2014.