Getaneh Bayu Tefera1 and Ponnada A. Narayana1
1Diagnostic & Interventional Imaging, University of Texas at Houston, Houston, TX, United States
Synopsis
Different anisotropy indices
such as generalized anisotropy (GA) and generalized fractional anisotropy (GFA)
for HARDI data have been reported, but they have their own limitations. Here we
propose a new anisotropy measure (HFA) for the HARDI data that is rotationally
invariant. The new proposed measure is compared with GA and GFA using the
contrast-to-noise ratio and coefficient of variation as the metrics for three
white matter regions. HFA and GFA have shown better CNR than FA and GA
in two and three crossing regions. The results described above were very
similar across all the five subjects.Introduction
High angular resolution diffusion imaging (HARDI) was introduced to overcome a major limitation of conventional diffusion tensor imaging (DTI). Methods that describe the apparent diffusion coefficient (ADC) profile using high-order tensors is one of the estimation methods associated with HARDI data [1]. Several anisotropy indices such as generalized anisotropy (GA) and generalized fractional anisotropy (GFA) for HARDI profiles have been reported in the literature [2, 3, and 4]. Since GFA depends on the number of tessellation of the sphere, it is not well-defined and GA overestimates the white matter anisotropy. We propose here a well-defined and rotationally invariant anisotropy measure for HARDI data using the L
2-norm of the diffusivity function of the higher order tensor. This is an extension of the conventional fractional anisotropy measure (FA). The new proposed high order tensor fractional anisotropy measure (HFA) was compared with GA and GFA using the contrast-to-noise ratio (CNR)[5] and coefficient of variation (CV) as the metrics. The results of different anisotropic measures were compared for single, two, and three crossing fiber regions in human brain.
Materials and Methods
The HARDI data was acquired on a Philips 3T
scanner on five males with no history of neurological or neuropsychiatric
disorders. A32-channel head coil with a SENSE factor of 2 was used for data
acquisition. Multi-slice, diffusion-weighted images were acquired using a single shot
spin echo EPI sequence with 81 diffusion encoding directions. The sequence
parameters were: FOV = 256x256 mm2, 44 contiguous slices with 3 mm
slice thickness, TR/TE = 8235/72 ms, b-value = 1600 s/mm2.
The new anisotropy
measure, HFA, is defined based on L2 distance of square-integrable
functions over a sphere. The
L2-distance between
two
square-integrable functions, f and g, over a sphere is given by [1]
$$\parallel f-g \parallel_2=\sqrt{\frac{1}{4\pi}\int_{S^2}(f-g)^2d\sigma}$$
The exact formula for the integration of a monomial $$P(X)=x^{\alpha_1}y^{\alpha_2}z^{\alpha_3}$$ is given by [6]
$$\int_{S^2}Pd\sigma = \begin{cases}0 & if&some& \alpha_j &are& odd\\\frac{2\Gamma(\beta_1)\Gamma(\beta_2)\Gamma(\beta_3)}{\Gamma(\beta_1+\beta_2+\beta_3)} & if &all &\alpha_j &are& even\end{cases}$$
where α1,α2, and α3 are nonnegative integers ,
βj = (αj+1)/2, Γ is the gamma function and σ is
a measure on the surface of a sphere .
Similar to the FA definition $$FA=\sqrt{\frac{3}{2}\frac{\sum_1^3(\lambda_i-\lambda)^2}{\sum_1^3\lambda_i^2}}=\sqrt{\frac{3}{2}}\frac{\parallel D-<D>\parallel_2}{\parallel D\parallel_2}$$
based on the L2-distance HFA
can be expressed as
$$HFA=\frac{\parallel D- <D>\parallel_2}{\parallel D\parallel_2}$$
where D is diffusivity
function
and <D> is the mean diffusivity value as defined
in [4] and IS is the totally symmetric
identity tensor [3, 7].
For fourth order tensors, IS is expressed as in [7]. To quantitatively compare
various 4th and 6th order tensor anisotropy measures
(HFA, GFA and GA) we used the contrast-to- noise ratio (CNR) which is defined in
[5] and coefficient of
variation.
Results and Discussion
The
various anisotropy measures were compared for three regions: single, two and
three fiber crossings (Fig 1). From Fig.2 we can see that HFA, GFA
and GA values derived from the 6
th order are similar to those based
on the 4
th order tensor for all three different fiber crossing
regions (Fig. 1). For all the three anisotropic measures based on the HARDI
data the CNR between the gray and white matter regions for order 4 was found to
be superior or equal to that of order 6 (Fig. 3). The FA derived from
conventional tensor model of HARDI data has better CNR than the others for single
fiber bundle (splenium) whereas GA had a better CNR than others in two and
three crossing regions (Fig.3). This might be because of the over estimation of
GA in white matter regions. GA has the
lowest CV in all three white matter regions and FA has the highest CV in two
and three crossing fiber bundle regions (Fig.4).
Landgraf et al [8] have shown that the
anisotropic measure defined using the L
2-norm of ODF function is the
limiting value of the generalized fractional anisotropy (GFA) based on the ODF
values. For most of the comparisons we performed, HFA and GFA behaved very
similarly. Unlike GFA, HFA that we introduced in this work is well-defined as
it only depends on the independent tensor elements and it is also rotationally
invariant. For all the three
anisotropic measures of all three different white matter regions the CNR of the
4
th order is greater than that of the 6th order. HFA and
GFA have shown better CNR than FA and GA in two and three crossing regions. The
CV and CNR of HFA and GFA are very similar. The results described above were
very similar across all the five subjects, suggesting the robustness of the
proposed methodology.
Acknowledgements
No acknowledgement found.References
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