Mohammed Salman Shazeeb1,2, Jayashree Kalpathy-Cramer1, and Bashar Issa2
1Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States, 2Department of Physics, UAE University, Al-Ain, Abu Dhabi, United Arab Emirates
Synopsis
Brain vasculature is conventionally represented as straight
cylinders when simulating BOLD contrast effects in fMRI. In reality, the
vasculature is more complicated with branching and coiling especially in tumors.
We applied a cylinder fork model to reflect the bifurcation, tortuosity, and
size of vessels and performed simulations to study the effect of the rotation
angle (ϕ) on R2* at
different bifurcation angles (β), vessel
diameters, diffusion constants, and susceptibility values. This model clearly
showed an R2* dependence on ϕ, which
could potentially be used as a tool to differentiate between normal and tumor
vessels.Introduction
A
cylinder fork model (CFM) was previously proposed [1] to simulate blood
oxygenation level dependent (BOLD) contrast effects in functional magnetic
resonance imaging (fMRI). The CFM reflects a more realistic model of the human
cortical vasculature [2,3] compared to infinite long cylinders [4] by
incorporating bifurcations and vessel size. The effect of diffusion was also
investigated using the CFM where a clear dependence was observed between the relaxation
times and the bifurcation angle at different diffusion scenarios [5]. This
study further improves the CFM model by incorporating a rotational movement on
the plane of the CFM relative to the magnetic field. Since tumorous tissue exhibits vessels with
increased tortuosity and bifurcations with larger diameters compared to that of
normal tissue [3], the rotational angle (ϕ–Fig. 1a) can reflect the
tortuosity of vessels which adds an extra dimension for characterizing normal
and tumor vessels, in addition to the bifurcation angle (β–Fig. 1b) and the vessel
diameter. In this study, we quantified the CFM topology using ϕ and explored its
effect on R2* at different β and vessel diameters. We also investigated the
effects of diffusion and susceptibility (χ) on the R2* relationship with ϕ at
different β and vessel diameters within a range of physiological values.
Methods
Monte Carlo methods were used to quantify R2*
for cylindrical fork perturbers at different rotational and bifurcation angles (Fig.
1de) with the magnetic field
B0 oriented in three different directions (Fig. 1c). We modeled the
vasculature using a CFM composed of straight trunk (prior to bifurcation) of
half cube length and the bifurcating segments. The cube is of 64 µm sides and
incorporates cylinder fork segments (Fig. 1b shows 1, 3, 5, 7 and 9 segments at
β=0°) with varying angles (ϕ=0°, 15°, 30°, 45°, 60°, 75°, 90° and β=0°, 45°)
that were arranged close to symmetry without any overlapping vessels. For all
the orientations and with multiple forks in the same cube, the cylinder trunks
were set in a parallel orientation. The angle θ (Fig. 1a) between the trunk and
the magnetic field was 90° for orientations 1 and 3
with the vessel lying in the xy-plane (Fig. 1c), while θ=0° for orientation 2. This model was converted into a cubic 128×128×128 matrix.
Magnetic field perturbations were calculated using a forward 3D Fourier
transform of the susceptibility distribution of the CFM [6]. The simulations
were performed with a random walk of 40,000 protons using the same technique as
described before [1] using the following parameters: true vessel diameters of 2.8,
5.6 and 8.6 µm; diffusion constant (D) values of 1×10
-9, 1×10
-10
and 1×10
-11 m
2/s; χ values of 3×10
-8, 1×10
-7,
and 4×10
-7 in cgs units. R2* was calculated by linear least-square
fitting of log signal intensity versus volume fraction. Relaxation rates per
volume fraction unit were used to remove the dependence on vessel lengths and
emphasize the role of the ϕ. Analysis of variance
(ANOVA) test was performed to check for significant effects of ϕ on R2* at different D values.
Results and Discussion
R2* showed a clear dependence
on ϕ in all orientations and β values for all diameters, D, and χ values. Orientation
1 showed a symmetrical profile of R2* around ϕ=45° more clearly pronounced at β=0°
compared to β=45°, which is evident at the higher diameter and χ values (Figs.
2,3). A larger decrease of R2* with increasing ϕ at β=0° compared to β=45° was apparent
with orientation 3 (Figs. 4,5). Orientation 2 (data not shown) showed a mirror
effect of orientation 3 depicting an increase in R2* with increasing ϕ since ϕ=0°
in one case corresponds to ϕ=90° for the other due to the orientation of the
magnetic field (Fig. 1c). For both orientations 1 and 3 at β=0° and β=45°, the
R2* gap between the lower two D values and the highest D value becomes larger
with increasing diameter and χ values (for e.g. Figs. 2adg & 2def). This can
reflect a physiological scenario where with larger diameters (tumorous tissue) and
increased susceptibility (presence of contrast agent) can clearly delineate R2*
in relation to ϕ as being either in the fast exchange regime (high D value) or
in the intermediate-slow exchange regime (low D values). Since the water
exchange differs between normal and tumor tissue [7], these quantifications can
potentially aid in differentiating them.
Conclusion
R2* measurements indicated a clear dependence on ϕ in
all orientations. The change in R2* at larger values of β, χ, and diameter with
respect to D can potentially be exploited to distinguish between normal and
tumor vessels.
Acknowledgements
This
work was funded by the Emirates National Research Fund (Emirates NRF - 31S087).References
[1] Shazeeb and Issa (2015). Proc
Intl Soc Mag Reson Med 23: 3031
[2] Duvernoy et al. (1981). Brain
Res Bull 7:519-579;
[3] Coomber et al. (1988). J
Neuropath Exp Neur 47:29-40;
[4] Marques and Bowtell (2008). NMR
Biomed 21:553-565;
[5] Shazeeb and Issa (2015). Proc
Intl Soc Mag Reson Med 23: 3032
[6] Marques and
Bowtell (2005). Concept Magn Reson B 25B:65-78.
[7] Le Bihan et al. (1986). Radiol 161 :401-407.