Synopsis
Filter exchange imaging (FEXI) is a noninvasive method to
probe Apparent Exchange Rate (AXR). Understanding how diffusion anisotropy affects
AXR is fundamental in experimental design and interpretation of results. In
case of only two compartments, AXR is isotropic regardless of diffusion anisotropy.
The key finding of this work is that AXR is anisotropic even in systems with a
single exchange rate if there are more than two orientationally dispersed
compartments. These findings may guide identification of different fiber
populations and their directions and could be useful for analysis of fiber-specific
characteristics. Introduction
Apparent Exchange Rate (AXR) of water between
micro-environments with different apparent diffusivities can be quantified by
filter exchange imaging (FEXI). FEXI is based on a double diffusion encoding (DDE)
experiment with a variable mixing time
1,2. In tissue, AXR may depend on the diffusion
encoding direction
3. Understanding the effect that diffusion anisotropy has
on AXR is fundamental in experimental design and interpretation of results. We present
illustrative examples of anisotropic conditions that affect AXR. This study
indicates that AXR is expected to be confounded even in simple systems with a
single exchange rate if there are more than two orientationally dispersed
compartments.
Methods
Applying the original definition of AXR1 to anisotropic
systems, we have
$${\rm AXR}(\hat{\bf g})=-\lim_{t_{\rm m} \rightarrow 0}\frac{\partial }{\partial t_{\rm m}} \ln\left[\frac{D(\hat{\bf g})-D'(b_{\rm f},\hat{\bf g},t_{\rm m})}{D(\hat{\bf g})-D'(b_{\rm f},\hat{\bf g},t_{\rm m}=0)}\right],$$
where $$$\hat{\bf g}$$$ is the gradient encoding direction, tm is the mixing time, bf is the filter b-value and $$$D(\hat{\bf g})=\hat{\bf g}^T\bf{D}\hat{\bf g}$$$ and $$$D'(b_{\rm f},\hat{\bf g},t_{\rm m})=\hat{\bf g}^T {\bf D'}(b_{\rm f},t_{\rm m})\hat{\bf g}$$$ are projections along $$$\hat{\bf g}$$$ for the equilibrium and filtered diffusion
tensors, respectively. The filter efficiency1 also depends on direction and
is given by
$$\sigma(\hat{\bf g})=1-\frac{D'(b_{\rm f},\hat{\bf g},t_{\rm m}=0)}{D(\hat{\bf g})}.$$
For n exchanging compartments,
the equilibrium and filtered diffusivities are given by the weighted average $$D(\hat{\bf g})=\sum_n X_n^{\rm eq}D_n(\hat{\bf g})\;\;{\rm and}\\D'(b_{\rm f},\hat{\bf g},t_{\rm m})=\sum_n X_n(b_{\rm f},\hat{\bf g},t_{\rm m})\;D_n(\hat{\bf g}),$$
where $$$X_n^{\rm eq}$$$ and $$$X_n(b_{\rm f},\hat{\bf g},t_{\rm m})$$$ are signal population fractions for
compartment n at equilibrium and after filtering, respectively. The fractions
are perturbed depending on direction
$$X_n(b_{\rm f},\hat{\bf g},t_{\rm m}=0)=\frac{X_n^{\rm eq}\exp[-b_{\rm f}D_n(\hat{\bf g})]}{\sum_k X_k^{\rm eq}\exp[-b_{\rm f}D_k(\hat{\bf g})]}.$$
The
evolution of the fractions $$$ {\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m})$$$ follows first order exchange kinetics4,5,
$${\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m})=\exp({\bf K}t_{\rm m})\;{\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m}=0),$$
where
K is the rate matrix fulfilling the equilibrium
condition $$${\bf K}\cdot{\bf X}^{\rm eq}= 0$$$.
Consider a case of three anisotropic components,
two intracellular and one extracellular (Fig.
1A). Spins in the two intracellular compartments (equilibrium signal
fractions f1 and f2,) can exchange between
each other only via the extracellular compartment (signal fraction fe). The rate matrix is given
by
$${\bf K}=\begin{bmatrix}-k_{\rm 1e} & 0 & k_{\rm e1} \\0 & -k_{\rm 2e} & k_{\rm e2} \\k_{\rm 1e} & k_{\rm 2e} & -k_{\rm e1}-k_{\rm e2} \end{bmatrix}.$$
The $$${\rm AXR}(\hat{\bf g})$$$ was calculated analytically in the limit of low bf (expression not reported here). For each compartment in our
examples, we used axially symmetric diffusion tensors with axial and radial
diffusivities given by: D0
and D0/10 for the
extracellular (Fig. 1B,D,E), D0/2 and D0/20 for the intracellular (Fig. 1B,D,E) and D0
for the isotropic extracellular compartment (Fig. 1C), where D0 = 10-9
m2s-1. We set k1e=
k2e = 1 s-1.
The signal fractions in equilibrium were set to Xeq = (0.8,0.2,0) (Fig. 1B) or Xeq = (0.4,0.2,0.4) (Fig. 1C,D). In Fig. 1E we used
1000
anisotropic intracellular compartments uniformly distributed in plane together
amounting to 80% of the equilibrium signal
fraction. For this example, the exchange matrix K is given in a similar fashion as above, but including 1000
intracellular compartments, and $$${\rm AXR}(\hat{\bf g})$$$ was numerically evaluated using
bf=1010sm-2
and tm time step of 1μs.
Results and discussion
Our model system allows investigating effects of anisotropy
on AXR. It mimics relevant tissue scenarios where water exchanges between
intracellular and extracellular compartments. For systems with only one
intracellular compartment (Fig. 1B),
AXR = k1e
+ ke1, which is
independent of direction, regardless of anisotropy of any of the compartments. The
filter efficiency, σ, will in general depend on
direction, which might introduce a fitting bias1. In this case, it might be
advantageous to fit the AXR model to arithmetically averaged data acquired in
multiple directions2, since this provides optimally maximized filtering.
Alternatively, data from different directions could be fitted with a single AXR
value using tensor representations for D,
D’ and σ.
When
more than two anisotropic compartments are included (Fig. 1C-E), the AXR depends on direction even in simple systems
with a single exchange rate (intracellular lifetime), provided that
intracellular compartments are orientationally dispersed. This effect can be understood
by noting that AXR
is reduced along the main axis of intracellular compartments (Fig. 1C-E). The AXR is dominated by
exchange from those compartments that are mostly affected by the filter. Examples in Fig.
1C-E also show that the degree of AXR anisotropy cannot be inferred from
the diffusion tensor model alone. Furthermore, the filter efficiency σ, which is very sensitive to anisotropy, cannot reveal the presence of
multiple compartments. Higher specificity to different anisotropic
configurations can thus be achieved if a combination of $$$D(\hat{\bf g})$$$, $$$\sigma(\hat{\bf g})$$$ and $$${\rm AXR}(\hat{\bf g})$$$ is
considered, which may guide identification of different fiber populations and
their directions within a voxel. In conclusion, we have found that the AXR is
anisotropic even in simple systems. This is of importance in the interpretation
of the AXR, but could also be useful for detailed analysis of fiber-specific
characteristics.
Acknowledgements
The first received the Swedish VINNOVA agency grant 2013-04350.References
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