Apparent Exchange Rate in Multi-compartment Anisotropic Tissue
Samo Lasič1, Sune N. Jespersen2,3, Henrik Lundell4, Markus Nilsson5, Tim B. Dyrby4, and Daniel Topgaard6

1CR Development, AB, Lund, Sweden, 2CFIN/MINDLab, Department of Clinical Medicine, Aarhus University, Arhus, Denmark, 3Department of Physics and Astronomy, Aarhus University, Arhus, Denmark, 4Danish Research Centre for Magnetic Resonance, Copenhagen University Hospital, Hvidovre, Copenhagen, Denmark, 5Lund University Bioimaging Center, Lund University, Lund, Sweden, 6Physical Chemistry, Lund University, Lund, Sweden

Synopsis

Filter exchange imaging (FEXI) is a noninvasive method to probe Apparent Exchange Rate (AXR). Understanding how diffusion anisotropy affects AXR is fundamental in experimental design and interpretation of results. In case of only two compartments, AXR is isotropic regardless of diffusion anisotropy. The key finding of this work is that AXR is anisotropic even in systems with a single exchange rate if there are more than two orientationally dispersed compartments. These findings may guide identification of different fiber populations and their directions and could be useful for analysis of fiber-specific characteristics.

Introduction

Apparent Exchange Rate (AXR) of water between micro-environments with different apparent diffusivities can be quantified by filter exchange imaging (FEXI). FEXI is based on a double diffusion encoding (DDE) experiment with a variable mixing time1,2. In tissue, AXR may depend on the diffusion encoding direction3. Understanding the effect that diffusion anisotropy has on AXR is fundamental in experimental design and interpretation of results. We present illustrative examples of anisotropic conditions that affect AXR. This study indicates that AXR is expected to be confounded even in simple systems with a single exchange rate if there are more than two orientationally dispersed compartments.

Methods

Applying the original definition of AXR1 to anisotropic systems, we have

$${\rm AXR}(\hat{\bf g})=-\lim_{t_{\rm m} \rightarrow 0}\frac{\partial }{\partial t_{\rm m}}⁡ \ln\left[\frac{D(\hat{\bf g})-D'(b_{\rm f},\hat{\bf g},t_{\rm m})}{D(\hat{\bf g})-D'(b_{\rm f},\hat{\bf g},t_{\rm m}=0)}\right],$$

where $$$\hat{\bf g}$$$ is the gradient encoding direction, tm is the mixing time, bf is the filter b-value and $$$D(\hat{\bf g})=\hat{\bf g}^T\bf{D}\hat{\bf g}$$$ and $$$D'(b_{\rm f},\hat{\bf g},t_{\rm m})=\hat{\bf g}^T {\bf D'}(b_{\rm f},t_{\rm m})\hat{\bf g}$$$ are projections along $$$\hat{\bf g}$$$ for the equilibrium and filtered diffusion tensors, respectively. The filter efficiency1 also depends on direction and is given by

$$\sigma(\hat{\bf g})=1-\frac{D'(b_{\rm f},\hat{\bf g},t_{\rm m}=0)}{D(\hat{\bf g})}.$$

For n exchanging compartments, the equilibrium and filtered diffusivities are given by the weighted average $$D(\hat{\bf g})=\sum_n X_n^{\rm eq}D_n(\hat{\bf g})\;\;{\rm and}\\D'(b_{\rm f},\hat{\bf g},t_{\rm m})=\sum_n X_n(b_{\rm f},\hat{\bf g},t_{\rm m})\;D_n(\hat{\bf g}),$$

where $$$X_n^{\rm eq}$$$ and $$$X_n(b_{\rm f},\hat{\bf g},t_{\rm m})$$$ are signal population fractions for compartment n at equilibrium and after filtering, respectively. The fractions are perturbed depending on direction

$$X_n(b_{\rm f},\hat{\bf g},t_{\rm m}=0)=\frac{X_n^{\rm eq}\exp[-b_{\rm f}D_n(\hat{\bf g})]}{\sum_k X_k^{\rm eq}\exp[-b_{\rm f}D_k(\hat{\bf g})]}.$$

The evolution of the fractions $$$ {\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m})$$$ follows first order exchange kinetics4,5,

$${\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m})=\exp({\bf K}t_{\rm m})\;{\bf X}(b_{\rm f},\hat{\bf g},t_{\rm m}=0),$$

where K is the rate matrix fulfilling the equilibrium condition $$${\bf K}\cdot{\bf X}^{\rm eq}= 0$$$.

Consider a case of three anisotropic components, two intracellular and one extracellular (Fig. 1A). Spins in the two intracellular compartments (equilibrium signal fractions f1 and f2,) can exchange between each other only via the extracellular compartment (signal fraction fe). The rate matrix is given by

$${\bf K}=\begin{bmatrix}-k_{\rm 1e} & 0 & k_{\rm e1} \\0 & -k_{\rm 2e} & k_{\rm e2} \\k_{\rm 1e} & k_{\rm 2e} & -k_{\rm e1}-k_{\rm e2} \end{bmatrix}.$$

The $$${\rm AXR}(\hat{\bf g})$$$ was calculated analytically in the limit of low bf (expression not reported here). For each compartment in our examples, we used axially symmetric diffusion tensors with axial and radial diffusivities given by: D0 and D0/10 for the extracellular (Fig. 1B,D,E), D0/2 and D0/20 for the intracellular (Fig. 1B,D,E) and D0 for the isotropic extracellular compartment (Fig. 1C), where D0 = 10-9 m2s-1. We set k1e= k2e = 1 s-1. The signal fractions in equilibrium were set to Xeq = (0.8,0.2,0) (Fig. 1B) or Xeq = (0.4,0.2,0.4) (Fig. 1C,D). In Fig. 1E we used 1000 anisotropic intracellular compartments uniformly distributed in plane together amounting to 80% of the equilibrium signal fraction. For this example, the exchange matrix K is given in a similar fashion as above, but including 1000 intracellular compartments, and $$${\rm AXR}(\hat{\bf g})$$$ was numerically evaluated using bf=1010sm-2 and tm time step of 1μs.

Results and discussion

Our model system allows investigating effects of anisotropy on AXR. It mimics relevant tissue scenarios where water exchanges between intracellular and extracellular compartments. For systems with only one intracellular compartment (Fig. 1B), AXR = k1e + ke1, which is independent of direction, regardless of anisotropy of any of the compartments. The filter efficiency, σ, will in general depend on direction, which might introduce a fitting bias1. In this case, it might be advantageous to fit the AXR model to arithmetically averaged data acquired in multiple directions2, since this provides optimally maximized filtering. Alternatively, data from different directions could be fitted with a single AXR value using tensor representations for D, D’ and σ.

When more than two anisotropic compartments are included (Fig. 1C-E), the AXR depends on direction even in simple systems with a single exchange rate (intracellular lifetime), provided that intracellular compartments are orientationally dispersed. This effect can be understood by noting that AXR is reduced along the main axis of intracellular compartments (Fig. 1C-E). The AXR is dominated by exchange from those compartments that are mostly affected by the filter. Examples in Fig. 1C-E also show that the degree of AXR anisotropy cannot be inferred from the diffusion tensor model alone. Furthermore, the filter efficiency σ, which is very sensitive to anisotropy, cannot reveal the presence of multiple compartments. Higher specificity to different anisotropic configurations can thus be achieved if a combination of $$$D(\hat{\bf g})$$$, $$$\sigma(\hat{\bf g})$$$ and $$${\rm AXR}(\hat{\bf g})$$$ is considered, which may guide identification of different fiber populations and their directions within a voxel. In conclusion, we have found that the AXR is anisotropic even in simple systems. This is of importance in the interpretation of the AXR, but could also be useful for detailed analysis of fiber-specific characteristics.

Acknowledgements

The first received the Swedish VINNOVA agency grant 2013-04350.

References

1. Lasic S, Nilsson M, Lätt J, Ståhlberg F, Topgaard D. Apparent exchange rate mapping with diffusion MRI. Magn Reson Med. 2011; 66(2): 356–365.

2. Nilsson M, Lätt J, van Westen D, et al. Noninvasive mapping of water diffusional exchange in the human brain using filter-exchange imaging. Magn Reson Med. 2013; 69(6): 1572–80.

3. Sønderby CK, Lundell HM, Søgaard L V., Dyrby TB. Apparent exchange rate imaging in anisotropic systems. Magn Reson Med. 2014; 72(3): 756–762.

4. Zimmerman JR, Brittin WE. Nuclear magnetic resonance studies in multiple phase systems: lifetime of a water molecule in an adsorbing phase on silica gel. J Phys Chem. 1967; 61(4): 1328–1333.

5. Allan EA, Hogben MG, Shaw KN. Multi-site chemical exchange by NMR. Pure Appl Chem. 1972; 32(1): 9–26.

Figures

Figure 1: Anisotropic systems with two-compartment coupled exchange. A. Schematic of exchange coupling between two intracellular (red) and an extracellular compartment (blue). Rows B-E. Left to right: diffusion tensors with signal fractions and coupling, surface plots for D, σ and AXR. E. 1000 anisotropic intracellular compartments uniformly distributed in plane.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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