Julio Sotelo1,2,3, Jesús Urbina1,4, Bram Ruijsink5, David Nordsletten5, Israel Valverde6,7, Cristian Tejos1,2,8, Pablo Irarrazaval1,2,8, Marcelo Andia1,4,8, Daniel E Hurtado3,8, and Sergio Uribe1,4,8
1Biomedical Imaging Center, Pontificia Universidad Catolica de Chile, Santiago, Chile, 2Electrical Engineering Department, Pontificia Universidad Catolica de Chile, Santiago, Chile, 3Structural and Geotechnical Engineering Departement, Pontificia Universidad Catolica de Chile, Santiago, Chile, 4Radiology Department, School of Medicine, Pontificia Universidad Catolica de Chile, Santiago, Chile, 5Biomedical Engineering Department, King's College London, London, United Kingdom, 6Pediatric Cardiology Unit, Hospital Virgen del Rocio, Seville, Spain, 7Cardiovascular Pathology Unit, Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, Seville, Spain, 8Biological and Medical Engineering Institute, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Catolica de Chile, Santiago, Chile
Synopsis
A quantitative characterization of vortex flow as turbulence and energy may
offer a novel index of left ventricle (LV) dysfunction not available in
conventional indexes. In this work we propose a novel method based on finite
element interpolations to obtain a 3D quantitative maps of vorticity, helicity
density, kinetic energy, and energy loss derived from 4D-flow data sets of the LV.
This new method may offer
a novel index of LV dysfunction, permitting identify the vortex ring and the
magnitude of turbulence values not available in conventional indexes. In future
work we pretend validate clinically our method with patient data. Purpose:
The vortices that form
during left ventricular (LV) filling are critical determinants of directed
blood flow during ejection. One of the first works was developed by Won et al
in 1995
1 providing the first characterization of vortex flows in the
LV using 3D magnetic resonance velocity mapping, analyzing the
size, angular velocity and kinetic energy, in normal subject. Also studies
based on CFD and echocardiography reveal that the vortices in the LV
have a specific geometry and anatomical locations and any alteration of these
characteristics affect directly the efficiency and ventricle workload
2-5.
Recently, using magnetic resonance imaging the lambda2-method for the characterization of the vortices in the LV revealed
another features as shape, location and orientation of LV vortex
6. However,
all these studies consist in a qualitative characterization of vortex flow in
the LV. One notable exception is the work developed by Wong et al 2009
7,
in this work they make use of 2D planes in short axis to calculate the
vorticity using a finite-different formulation. Nevertheless, they omit all
information out of plane that can be relevant to characterize any vortex flow.
Additionally, is known that the finite-difference methods cannot handle the
smooth and complex boundaries, inducing important errors when the geometry is simplified
8. Therefore,
a quantitative characterization of vortex flow as turbulence (vorticity and
helicity) and energy (kinetic energy and energy loss) may offer a novel index
of LV dysfunction. In this work we propose a novel method based on a finite-element method to obtain a 3D quantitative maps of vorticity, helicity density,
kinetic energy, and energy loss in the LV derived from 4D-flow data sets.
Methods:
We developed a finite-element based
computational framework to obtain the velocity gradient in three orthogonal
direction generating continuous 3D maps of vorticity, helicity density, kinetic
energy, and energy loss in the LV. The algorithm was based in a similar
least-squares projection method previously published
9. Using a MR
Phillips Achieva 1.5T, we acquired 4D-Flow data of whole heart and
M2D-SSFP of short axis cover the entire ventricle, from fourth healthy volunteers
(one female and three male 31±3 years) without any know cardiac abnormality. A
summary of the MR acquisition parameters is shown in the Table I. We integrated
a chan-vese active contour algorithm, manual refinement of the segmentation and
contour smoothing, in Matlab (The MathWorks, Natick, MA, USA) to generate a tridimensional
segmentation of the M2D-SSFP images. This process allowed us to extract the
geometry of LV for each cardiac phase. The tetrahedral finite element mesh was
created from the M2D-SSFP segmentation using the iso2mesh library for Matlab (Figure
1). Using the transformation matrix generated with the DICOM header information, we aligned both data sets
including the tetrahedral mesh in reference to the volunteer position.
Thereafter, we were able to transfer each velocity value from 4D-Flow images to
each node of the tetrahedral mesh for each cardiac phase (Figure 2). The finite-element analysis and visualization was developed in Python and Paraview software (Kitware Inc., NY, USA) respectively.
Results and Discussion:
Result of LV end systolic volume, end diastolic
volume, stroke volume, cardiac output, ejection fraction and cardiac frequency for
each volunteer were: 40/73/61/71 ml, 116/157/140/180 ml, 76/84/79/109 ml, 4.3/4.5/5.2/4.9
L/min, 65/54/56/61% and 57/54/66/45 bpm for volunteer 1/2/3/4 respectively. Ventricular
volume characteristics are normal for all volunteers. In figure 3 we show the
result of 3D vorticity and helicity density maps in a middle systolic and
diastolic phases, for the LV of volunteer Nº1. In the same figure we also show
the ranges of vorticity and helicity density for all volunteers. In figure 3 we
observe the vortex rings around the mitral valve and aortic valve, in both systole
and diastolic phases, showing an increment of vorticity and helicity values in the
diastolic phase. In figure 4 we show the kinetic energy and energy loss for the
same cardiac phases and volunteer showed in figure 3, the range for these
parameters are shown in the bottom part of the figure. There was a greater energy loss in diastole compared to systole,
probably given by the turbulent flows presented in this part of the cardiac
cycle. Additionally, higher values of kinetic energy are visualized in the
systolic phase.
Conclusion:
We have proposed a
novel method that allowed us to obtain 3D maps
of vorticity, helicity density, energy loss and kinetic energy in the left
ventricle from 4D-flow MRI data using a finite-elements method. This new approach
offers novel index for the assessment of LV dysfunction. We are currently
working on validating this method in more volunteers and patients.
Acknowledgements
Anillo ACT 1416 and FONDEF #15I10284. JS thanks to CONICYT and Ministry of Education of Chile, with his
higher education program, for scholarship for doctoral studies.References
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