Marlon Arturo Pérez Rodas1,2, Jörn Engelmann1, Hellmut Merkle1, Rolf Pohmann1, and Klaus Scheffler1,3
1Ultra High-field Magnetic Resonance Center, Max Planck Institute for Biological Cybernetics, Tübingen, Germany, 2Graduate Training Centre of Neuroscience, IMPRS for Cognitive and Systems Neuroscience, University of Tübingen, Tübingen, Germany, 3Department for Biomedical Magnetic Resonance, University of Tübingen, Tübingen, Germany
Synopsis
The distinction of functional activity between
cortical layers in the brain by MRI or MRS requires high spatial and temporal
resolution. High spatial resolution can be achieved by increasing the gradient
strength or by using the intrinsic volume selectivity of miniature coils, even
in conventional animal scanner. In the present work, initial results for highly-localized
spectroscopy within seconds are presented, for a phantom metabolite solution
and cell cultures in a 14.1T animal scanner using a 2mm-diameter circular coil.
The larger signals from the major metabolites in ~1.5µL were detected in 24sec on
the phantom solution with an acceptable SNR.Purpose
To use the intrinsic volume selectivity of
miniaturized coils to perform highly-localized spectroscopy within seconds in
an animal scanner.
Methods
A 2mm-diameter circular coil (Fig.1), tuned, matched,
and configured as transceiver, is used in a Bruker Biospec spectrometer (Bruker
BioSpin GmbH, Ettlingen, Germany) interfaced to a 14.1-T/26-cm horizontal
magnet (Magnex Scientific, Abingdon, Oxfordshire, UK). The coil was built with
a 400µm-diameter copper wire and is surrounded by plastic for
susceptibility-matching. Spectra of a phantom metabolite solution (Table 1) and
A9L mouse fibroblasts cells were acquired without using gradients. The same
type of culture chamber (Ibidi®, Germany) was used for growing the
cells and for measuring the phantom metabolite solution.
Two types of culture chambers were used: The
first has a polymer foil as bottom (thickness ~180µm), the second has a glass
bottom (thickness ~100µm), both with 400µm of chamber height. Several
experiments with FIDs acquisitions were performed with 128 (Fig.2) and 8 averages
(Fig.3), with TR=3sec (total scan times of 6:24min and 24sec, respectively) for
the phantom solution and cells. All FIDs were obtained with 4096 data points
(no water suppression). An exponential window function was applied prior to
Fourier transformation. After thorough phase correction, manual baseline
correction was performed.
Results
The measured linewidth for the phantom solution water-peak
was ~39Hz with a SNR=5536 (calculated as in Meier et al2). Spectra
from culture medium-only and the A9L cells showed linewidths between 32 to 58
Hz, and SNRs from 3117 to 5144. The estimated sensitivity volume of the coil in
the culture chamber was ~1.5µL. Figures 2-4 display resulting spectra of the
metabolite solution, culture medium-only, and A9L cells grown in culture
medium.
Discussion
Figures 2-3 shows the possibility to detect the
resonances of all metabolites from a small volume (~1.5µL) in an acceptable
scan time 6:24min (Fig.2) for the
phantom solution, where even the multiplet resonances of choline methylene
groups (2H, 5mM) are well visible. Even with reduced scan time (24sec) we are still
able to obtain the larger signals from the major metabolites with still
acceptable SNR (Fig.3).
Figure 4 displays the results from the cell
measurements. In the spectrum of pure cell culture medium-only the resonances
of glucose (4.5mM) are detectable when measured in the 180µm-thick-polymer-bottom
culture chamber. All other medium ingredients (next highest concentrated is
glutamine with 2mM) are too lowly concentrated to be reliably detected. Comparing
the spectra obtained in the presence of cells with the one of medium-only, a
reduction of the glucose signals can be observed. In addition, the lactate signal
appears, which is a metabolic product of the cells, is excreted by the cells
and thus accumulates gradually in the medium. However, no metabolites from
inside the cells could be detected. Since the monolayer of cells has only a
height of ~5-15µm, the contribution of intracellular metabolites to the signal
from the sensitive volume is most likely too low under current conditions. As
expected, the sensitivity increased when switching from normal culture chambers
with 180µm thick bottom to the 100µm of glass-bottom chambers allowing the
potential detection of additional metabolites (e.g. glutamine) in the medium.
Conclusion
The major metabolites in the phantom solution can
be detected at physiological concentrations in few seconds to minutes with the
current setup when reaching these concentrations in the whole sensitive volume.
For metabolites in cells that are grown in a monolayer, this prerequisite is
not fulfilled. Therefore, at the moment the presence of cells is only
indirectly detectable by changes in the culture medium, for instance the
accumulation of lactate or the decrease of glucose. However, using these
microcoils on/in tissue so that preferentially the whole sensitive volume above
the coil is filled by cells/tissue should permit the detection of the higher-concentrated
intracellular metabolites. Experiments on ex-vivo tissue samples are under
progress. More improvements are needed in the coil construction, electronics,
and pulse-sequence design, in order to achieve faster and highly-localized spectra. The
linewidth will be improved by using better susceptibility-matched materials for
the coil and its surroundings. Further miniaturization and microelectronics
integration
3 will allow insertion and in-vivo studies
4 of
localized activity within single layers with high temporal resolution.
Acknowledgements
No acknowledgement found.References
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