Albert P Chen1, Ralph E Hurd2, Angus Z Lau3, and Charles H Cunningham4,5
1GE Healthcare, Toronto, ON, Canada, 2GE Healthcare, Menlo Park, CA, United States, 3Physiology, Anatomy and Genetics, University of Oxford, Oxford, United Kingdom, 4Physical Sciences, Sunnybrook Health Sciences Centre, Toronto, ON, Canada, 5Medical Biophysics, University of Toronto, Toronto, ON, Canada
Synopsis
A
method for single volume dynamic hyperpolarized 13C MRS acquisition
is proposed. Using a slice
selective pulse-acquire pulse sequence with 2D spiral readout this technique
enables 3D localization of the MRS data.
By confining the readout trajectory to each dwell time, the raw data
sampled during the trajectory are averaged by the digital filter, thus the
output data represent only the center voxel and no k-space data sorting and
reconstruction are required. This
sequence can be used practically the same way as a standard pulse-acquire
acquisition for HP13C experiments, but the spectrum will be
localized to a 3D volume. Introduction
Single voxel (SV) localization for hyperpolarized
13C
MRS acquisition is uncommon and difficult because the non-equilibrium
magnetization can be easily saturated by the transitions of the refocusing pulses
or outer volume suppression pulses.
Thus for most of the dynamic hyperpolarized
13C MRS
experiments to date, localization of the data has been accomplished by pulse-acquire
method with just small tip selective RF excitation of large slabs through the
subject (1). Single voxel
localization using a modified PRESS sequence with ‘notch’ spectral-spatial
refocusing pulses has been demonstrated recently for dynamic hyperpolarized
13C
experiments (2). However, the relatively
high B
1 and long pulse duration required for notch refocusing pulses that have
good spatial and spectral profiles, and hyperpolarized substrates may still be
saturated if there are large B
0 inhomogeneities within the coil
volume. Spectroscopic Imaging
Acquisition Mode (SIAM) was proposed previously to eliminate out of slice
artifact for SV MRS acquisitions (3). In this method, spectroscopic data can be localized to
the center slice or voxel of the FOV if k-space samples are acquired in the typical
pattern for CSI and summed, recovering the single voxel at the center of the FOV. Here, a spiral gradient trajectory is used to acquire 2D
k-space and spectroscopic data during a single readout, after a slice selective
RF excitation pulse. It is shown
that
13C MRS data may be localized to a single volume from just one
pulse-acquire acquisition using this approach. By confining the net duration of each 2D trajectory to a
single dwell period of the spectroscopic readout (see Fig. 1), the raw data
sampled during the trajectory / dwell are averaged by the digital filter and the
output data represent only the center voxel of the image with no k-space data
sorting and reconstruction are required.
The proposed sequence can be used practically in the same way as a
standard pulse-acquire MRS acquisition for HP
13C experiments, but
the spectrum from the experiment will be localized to a single 3D voxel.
Methods
Readout Trajectory Design: The 2D SIAM gradient readout trajectory was designed in MATLAB (MathWorks). A 4-turn constant velocity spiral trajectory
was designed for 26 cm FOV and 3.3 cm nominal resolution. The trajectory has max gradient slew
rate of 18.6 G/cm/ms and max gradient amplitude of 1.62 G/cm. The gradient was rewound to zero using the bisection method. The total duration of the trajectory and
thus the spectral acquisition dwell time was 1.76 ms (568 Hz spectral
bandwidth). The trajectory was
repeated 72 times for a total readout duration of 126.72 ms. The k-space trajectory,
the gradient waveform as well as simulated point-spread-function are shown in
Fig. 1.
Phantom
experiments: The study was performed using a 3T GE MR750 scanner (GE
Healthcare) with a dual-tuned
1H/
13C birdcage rat coil (GE). A 38 mm
OD HDPE sphere filled with 1.0 M
13C bicarbonate solution and an 18
mm OD sphere filled with 8.0 M
13C urea solution were used in the
phantom experiments. MR
spectroscopy experiments were performed using a slice selective pulse-acquire
pulse sequence with and without the 2D SIAM readout trajectory (from a 1.5 cm
slab through both phantoms, flip angle = 10°, 32 averages, TR = 2 s, 568 Hz /
72 pts readout). The FOV was
centered on the 13C bicarbonate sphere.
Results and Discussions
Data from
13C
phantoms acquired with a pulse-acquire pulse sequence with and without the SIAM
gradients applied are shown in Fig. 2. Without the readout gradients (Fig. 2, center), no in-plane
spatial localization was performed and
13C bicarbonate and
13C
urea have similar signal intensities in the spectrum. With the SIAM
spiral readout trajectory (Fig. 2, right), the signal from the urea phantom
that is away from the center of the FOV was significantly reduced. The
13C urea /
13C
bicarbonate signal ratio reduced by 89% with the readout gradient as compared
to without; and this suppression of the outer volume signal (
13C
urea) is similar to what was predicted by the PSF of the spiral trajectory (the
ripples were 10% of the maximum intensity). Since the spiral trajectory was rewound and placed inside
each dwell, no k-space gridding and spatial reconstruction was necessary and the
time domain data from the scanner was simply Fourier transformed to obtain the in-plane
localized spectrum. Non-spiral
trajectories would work similarly and may provide different tradeoffs between
localization (PSF) and spectral bandwidth (duration of the trajectory), as long
as the trajectory starts and ends at k=0
and the k-space density is
roughly uniform.
Conclusions
Conclusions: A method for single volume dynamic hyperpolarized
13C MRS acquisition was demonstrated using a simple slice selective pulse-acquire pulse sequence with 2D SIAM spiral readout. This technique enables acquisition of dynamic
13C MRS data from a single voxel within the tissue / organ of interest.
Acknowledgements
No acknowledgement found.References
1. Hurd RE et al. JMRI.
2012;36(6):2014-28. 2. Chen AP et al. JMR. 2015;258:81-5. 3. Hurd RE. Patent
US5804966A.