Nicolaas AJ Puts1,2, Kimberly L Chan1, Ashley D Harris1,2,3,4, Peter B Barker1,2, and Richard AE Edden1,2
1Radiology and Radiological Science, Johns Hopkins University, Baltimore, MD, United States, 2F.M. Kirby Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, United States, 3Alberta Children's Hospital Research Institute, University of Calgary, Calgary, AB, Canada, 4Radiology, University of Calgary, Calgary, AB, Canada
Synopsis
MM-suppressed
GABA measurements use symmetric editing of both MM and GABA signals. Frequency
drift, either by gradient induced heating/cooling, or motion, significantly affects
the editing efficiency of GABA and MM. To stabilize the center frequency, we
interleaved the unsuppressed water acquisition throughout the scan and used it
to correct the frequency, in eight healthy participants, and compared this to a
condition without frequency correction. Frequency correction improves spectral
quality of MM-suppressed GABA editing in vivo.Background
Typical
GABA-edited
1H magnetic resonance spectroscopy suffers from as much
as 50%
1 macromolecular (MM) contamination of the GABA
signal at 3 ppm, as the frequency selective editing pulse for GABA (at 1.9 ppm)
also partially inverts MM signals (at 1.7 pm). Symmetrical editing, by applying
the editing pulses around the 1.7 MM peak (at 1.9 and 1.5 ppm) allows for the
suppression of unwanted MM signal as the MM signal is inverted to an equal
degree in both the ON and OFF experiments
2. However, field instability may occur during
the course of an experiment due to patient movement and/or gradient-induced
heating/cooling
3. For MM-suppressed experiments specifically, field
changes can substantially change the editing efficiency of the editing target
molecule and result in imperfect symmetric suppression of nulled contaminants,
which cannot be addressed by retrospective frequency-and-phase correction
before signal averaging
3-5. Frequency correction during scanning (in
addition to post-hoc frequency correction) is therefore required. This abstract
describes the implementation of a modified prospective frequency scheme which
adds no additional scan time, and demonstrates its use in vivo under both low
and high drift rate conditions.
Methods
MM-suppressed
GABA MRS data were acquired on a Philips 3T Achieva scanner, in eight healthy
participants (5F) with the following parameters; TE/TR 80/2000 ms; 20 ms
editing pulses at 1.9 (ON) and 1.5 (OFF) ppm, 320 transients, 32 channel head
coil. Measurements were made from (3.5cm)
3 voxel placed in the
midline parietal lobe. Two acquisitions were made for each participant, one
with frequency correction on (FC-on) and one with frequency correction off
(FC-off). Frequency correction was performed based on a periodically acquired
water signal (without water suppression) from the localized volume: rather than
acquiring 16 averages (one full phase cycle) of water reference data at the
start of the acquisition (Fig. 1B), as is typically done for eddy-current
correction
6 and quantification.Instead these reference transients were
interleaved throughout the acquisition (Fig 1A). Data were acquired under
either high or low field drift conditions (high drift being induced in a single
case by a preceding 1 hour EPI/DTI acquisition known to cause gradient heating,
lower drift induced by a preceding 2 min DTI acquisition). For one participant,
only FC-on was acquired. All data were processed using Gannet7, including a further post-hoc frequency
correction
5 to minimize subtraction artifacts. GABA levels
were quantified relative to the unsuppressed water signal from the same volume.
Results
Comparison
of in vivo data with- and without prospective frequency correction (FC-on and
FC-off), show considerably more stable water frequencies with correction on
(Fig 2AB). Fig 3C shows more variability in the water frequency drift in the
FC-off condition (2.01 ± 0.43 Hz; without outlier 1.07 ± 0.52) than in the
FC-on (0.81 ± 0.43 Hz; without the scan coupled to outlier: 0.61 ± 0.32 Hz).
As shown in Figures 2A and 2B, there exists considerable drift after an hour of
EPI/DTI imaging without FC (46 Hz), but is limited (and corrected) with
frequency correction to a maximum of 6.4 Hz. Substantial drift leads to altered
editing of both the GABA and MM peak (editing pulses are no longer on-resonance) leading to an apparently negative ‘GABA’ peak in this case (Figure
3B). While in the case of mild drift there are no significant differences in average
GABA levels, GABA levels in the FC-off condition are more variable (standard
deviation FC-off 0.23 and FC-on 0.16). The GABA levels are lowest for the scans
after 2 min of DTI, and negative (not shown for FC-off) after 2hr of
DTI/EPI (Figure 3D).
Discussion
Symmetric
suppression is an elegant concept that allows an unwanted co-edited signal to
be removed, augmenting the selectivity of the editing pulses themselves. This
symmetry is broken by changes in the scanner frequencies that arise from
subject movement or temperature-related scanner drift, leading to artifactual
increases or decreases in the edited signal. GABA values tend to lower with
increasing drift, and interpretation of the GABA peak when inappropriately
edited, is problematic. By interleaving
the water reference scans throughout the acquisition, the water frequency can
be corrected prospectively, reducing the effect of drift of data quality (a
maximum drift of 6.4 Hz corresponds to 0.04 ppm and it's well known editing efficiency drops off quickly off-resonance), and effect of drift of the
efficiency of the editing pulses, considerably improving data quality.
Conclusion
Drift has a strong and
immediate impact on MM-suppressed GABA MRS measurements. Given the strong
reliance on applied editing pulses on resonance in symmetric MM-suppression, we
do not recommend applying MM-suppression without the use of prospective frequency
correction during scanning.
Acknowledgements
NIH grants:
R01 EB016089, P41EB015909, R21 NS077300References
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