Yi Chen1,2, Filip Sobczak1, and Xin Yu1,2
1Research Group of Translational Neuroimaging and Neural Control, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, Tuebingen, Germany, 2Graduate School of Neural Information Processing, University of Tuebingen, Tuebingen, Germany
Synopsis
A key challenge of the fiber
optic-mediated multi-model fMRI methodologies is locating the fiber tip
accurately and precisely to target deep
brain nuclei. The requirement of precision is only several hundreds of microns
in the animal brains. In this work, a multi degree of freedom robotic arm was
developed with the use of step motors. The setup is in compatible with 14.1T MRI
scanner. This MRI-guided robotic arm provides visually monitored fiber
insertion to reduce the position error significantly in the perfused rat brain.Target Audience
Scientists/radiologists who are interested in interventional surgeries with robotic
control, e.g. deep brain stimulation.
Purpose
The multi-model
neuroimaging methodologies on animal models are crucial for better
understanding brain function
1. The neuron-glia-vessel (NGV) network
is one of the most challenging areas given the multifaceted requirements of
signal acquisition from the brain
2,3. By using fiber optics, it is
possible to target certain brain regions to deliver light pulse for
photo-activation or acquiring cell-specific calcium signal simultaneously with
fMRI
4, 5. These existing methodologies provide us the possible
platform to better characterize the NGV network activity upon brain activation.
A key challenge of the fiber optic-mediated multi-model fMRI methodologies is
how to locate fiber tips accurately and precisely to target the deep brain
nuclei with the size of only a few hundred microns. The development of MRI-guided
insertion by a robotic arm should significantly reduce the position error of
fiber tips. Meanwhile, an optimized fiber insertion trajectory in the brain is
required in order to investigate the effectiveness, safety and feasibility of deep
brain nuclei targeting for translational application. The goal of this study is
to create a multiple degree-of-freedom robotic controlling system to target
brain nuclei in the rat brain inside the high field MRI scanner.
Methods
With the use of step motors,
we have developed a high-field 14.1T MRI-guided multi degree of freedom robotic
arm for fiber placement. The head part of the robotic arm drives the fiber
insertion into the brain with an insertion angle. This study tested the robotic
arm movement to target centrolateral thalamic nucleus(CL) and internal capsule(ic) in a perfused rat
(250g) brain. The rat brain was fixed in soft agar which contained manganese and
was placed on a custom-designed MRI-compatible cradle to simulate
a real rat experiment. A 24mm-diameter custom-designed transmit/receive
surface coil was located on the brain while the fiber could be inserted into
the brain through the hole of the coil driven by the robotic arm. In this configuration, the cradle with the rat brain was placed
into the iso-center of the 26cm horizontal bore magnet while the robot controller
and power supply for motor controls were placed in the scanner room at
approximately 4.7 meters distance from the scanner’s bore to avoid the electromagnetic
interference. MRI scans were performed using 2D rapid acquisition with
relaxation enhancement (RARE) sequence: TR, 1500ms, TE, 23.9ms, 192X144 matrix,
0.1X0.1X0.4 mm3 spatial resolution. The fiber’s diameter was 200um. After the first image was
transfered into the navigation workstation, the operator defined a target for
fiber insertion on MRI image transfered from the scanner and calculated the
steps for fiber insertion. The step motor drove the head part to make the fiber
move 100um into the rat brain at each step and then started the next scan
automatically.
Results
In this study, we demonstrated a MRI-compatible
rotobic fiber placement in the MRI scanner, such as targeting ic, as
illustrated in Fig.1. The capability to place the fiber with different depth is
particularly useful to target multiple sites along the insertion path. Fig.2 A shows
the targeting position in the rat brain atlas with the Bregma and Interaural position:
-3.48mm and 5.52mm, respectively. Fig.2 B shows the fiber location in the targeted
brain region, centrolateral thalamic nucleus, which is illustrated in Fig.2
D. Fig.3 shows three images with two motor steps to clarify the precision of
the robotic arm. At each step, the fiber was one line of voxel deeper. Meanwhile, this distance difference was
maintained through the whole fiber insertion procedure.
Conclusion
We developed a
compact, MRI-compatible robotic arm inside the MRI scanner to provide a flexible
fiber location for simultaneous fMRI and fiber-optic recording of fluorescent
calcium signal in rat brain. This work would
provide a reliable, efficient multi-modal fMRI platform to study the neurovascular
coupling in real rat model. The MgRA system can be
translated to support human intervention surgical procedures, e.g. deep brain
stimulation, in multiple brain targeting tasks.
Acknowledgements
The financial support of the
Max-Planck-Society and the China Scholarship Council (PhD fellowship to Yi Chen)
are gratefully acknowledged. We thank Mr. Shanyi Yu
for building up the first prototype of the robotic arm and Mr. Johannes Boldt for
helping to improve the MgRA system.References
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