Emma Meeus1,2,3, Jan Novak2,3, Stephanie Withey2,3,4, Lesley MacPherson3, and Andrew Peet2,3
1Physical Sciences of Imaging in Biomedical Sciences (PSIBS) Doctoral Training Centre, University of Birmingham, Birmingham, United Kingdom, 2Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom, 3Department of Oncology, Birmingham Children's Hospital, Birmingham, United Kingdom, 4RRPPS, University Hospitals Birmingham NHS Foundation Trust, Birmingham, United Kingdom
Synopsis
This study
investigated the bi-exponential IVIM fitting methods and their robustness for applications
in the brain. Data simulations relevant to normal brain and tumour were
computed to assess the accuracy and precision of the IVIM perfusion parameters. The paediatric patient cohort evaluated the
correlation between the IVIM and DSC-MRI derived parameters. The simulation
results showed that the perfusion fraction (IVIM-f) was robust enough to
provide reliable values using the constrained 1-parameter fit. The robustness
was further confirmed with the significant correlation observed between the
IVIM-f and DSC-CBV. Therefore, IVIM-f could provide an alternative non-invasive
perfusion measure for paediatrics.Purpose
The Intravoxel
Incoherent Motion (IVIM) model has recently gained more interest with its
derivation of diffusion and perfusion related parameters (pseudodiffusion, D*
and perfusion fraction, f).
1 The IVIM method has largely been
accepted in the abdomen,
2 but applications in the brain and in
paediatrics have not been explored to a great extent.
3 Therefore, the aim of
this study was to evaluate the appropriateness of the fitting methods (Fig. 1)
in terms of the degree of bi-exponential behaviour and the signal-to-noise
ratio (SNR) with IVIM parameters derived from normal brain and tumours. A
comparison to DSC-MRI derived perfusion parameters was used to verify the
physical origins of the IVIM parameters.
Methods
The IVIM and
DSC data analysis was computed using in-house Python software (Anaconda,
Continuum Analytics, v.2.7.10) and the statistical analysis in SPSS Statistics
(IBM, v.22). For IVIM model simulations and patient data, non-linear least-squares
minimisation was performed using the Levenberg-Marquardt algorithm. The
bi-exponential fitting methods varied from a non-constrained simultaneous
fitting to a more constrained step-wise fitting (Fig.1). The IVIM grey matter
(GM) and tumour model data were created using IVIM parameters derived from the
relevant ROIs and with the same b-value distribution as used for the patient
imaging. Random Gaussian noise was added to the model data to mimic SNR levels
of 10-70.
Patient data
(6 brain tumour patients aged 1-10) was acquired on a Philips Achieva 3T TX MRI
scanner at the Birmingham Children’s Hospital using 32-multichannel receiver
head coil. The DW-MRI sequence used a sensitivity-encoded (SENSE) approach with
the following parameters: 11 exponentially spaced b-values (0-1000 s mm-2)
in three orthogonal directions, TR/TE 4,000/91 ms, FOV 240x240, acquisition
matrix 96x96, 30 slices with thickness of 3.5 mm and in-plane resolution
2.5x2.5 mm2. The scan duration was 2.12 minutes. The DSC-MRI used a protocol described
previously, as well as the computation of cerebral blood flow (CBF), cerebral
blood volume (CBV) and mean transit time (MTT). 4 ROIs were drawn
manually on co-registered T2-weighted images for healthy-appearing GM and
tumours and transferred to the perfusion maps for correlation analysis (Spearman
correlation coefficient, ρ).
Results
The data simulation
results are shown in Fig.2 and Table 1. The accuracy was measured using the theoretical
IVIM value and the mean value from 1000 data iterations and the precision in terms
of coefficient of variation. In the realistic SNRb1000 of 30 3, the constrained 1-parameter fitting was found
to produce the overall most accurate and precise IVIM parameters f and D* with average error/CV% 11.4/77.6% and
37.6/69.9 % in the low-perfusion regime and 16.4/35.8% and 3.33%/39.7% in the
high-perfusion regime, respectively.
Significant
voxel-wise correlations were observed in the GM between the IVIM-f and DSC-CBV
(ρ
= 0.271-0.588, P <0.01), IVIM-fD* and DSC-CBF (ρ =
0.302-0.543, P <0.01), respectively. The correlation between the IVIM-D* and DSC-MTT was not significant (ρ =
0.024-0.162, P >0.05). The voxel-wise correlations in the tumours were found
more variable with only a few cases showing any significant correlation (f-CBV ρ = 0.024-0.154,
D*-MTT ρ
= 0.009-0.388, fD*-CBF ρ = 0.031-0.434). Relative mean (mean tumour/mean GM) correlations
were also computed for the perfusion parameters (Fig.4). Significant
correlation was observed between the IVIM-f
and DSC-CBV parameters, using both 1-and 2-parameter fitting. Strong
correlations were also observed between the IVIM-fD* and DSC-CBF.
Discussion
The
simulations suggest that the IVIM-f is robust enough to provide reliable
results for low-perfused tumours and GM. The IVIM-D* was found to have
limited robustness for the tumour model, with noticeable higher variance
compared to IVIM-f (Fig.2). Overall, the 1-parameter fitting was found to be
the most robust in terms of accuracy and precision, with the smallest number of
outliers (Table 1).
The strong
correlation of IVIM-f and DSC-CBV confirms the perfusion related origins of the
f-parameter and further confirms the robustness of the 1-parameter fitting (Fig.4
and 5). The correlations between IVIM-D*, fD* and DSC-CBF, MTT, respectively,
were likely reduced due to the limited robustness of IVIM-D* fitting as
observed in the simulations. The IVIM-D* and DSC-MTT were found to correlate
for the younger cohort (ρ = 0.800, P <0.05), but an outlier case (age 10) was found
to reduce the correlation significantly. A larger cohort with a range of ages is
required to further investigate the effect of age on perfusion.
Conclusion
The IVIM-f
parameter using the 1-parameter fitting was found to provide a robust measure
of CBV in GM and low-perfused tumours in this paediatric cohort. With anti-angiogenic
treatment being increasingly used in these brain tumours, IVIM-f could provide a
contrast-free biomarker for assessing these tumours.
Acknowledgements
EM gratefully acknowledges financial support from the EPSRC through a
studentship from the PSIBS Doctoral Training Centre (EP/F50053X/1). AP holds an
NIHR Research professorship. JN and SW receive funding from Free Radio in
conjunction with Help Harry Help Others. The work was performed in the NIHR 3T
MR Research Centre.References
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