Evaluation of IVIM Perfusion Parameters as Biomarkers for Paediatric Brain Tumours
Emma Meeus1,2,3, Jan Novak2,3, Stephanie Withey2,3,4, Lesley MacPherson3, and Andrew Peet2,3

1Physical Sciences of Imaging in Biomedical Sciences (PSIBS) Doctoral Training Centre, University of Birmingham, Birmingham, United Kingdom, 2Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom, 3Department of Oncology, Birmingham Children's Hospital, Birmingham, United Kingdom, 4RRPPS, University Hospitals Birmingham NHS Foundation Trust, Birmingham, United Kingdom

Synopsis

This study investigated the bi-exponential IVIM fitting methods and their robustness for applications in the brain. Data simulations relevant to normal brain and tumour were computed to assess the accuracy and precision of the IVIM perfusion parameters. The paediatric patient cohort evaluated the correlation between the IVIM and DSC-MRI derived parameters. The simulation results showed that the perfusion fraction (IVIM-f) was robust enough to provide reliable values using the constrained 1-parameter fit. The robustness was further confirmed with the significant correlation observed between the IVIM-f and DSC-CBV. Therefore, IVIM-f could provide an alternative non-invasive perfusion measure for paediatrics.

Purpose

The Intravoxel Incoherent Motion (IVIM) model has recently gained more interest with its derivation of diffusion and perfusion related parameters (pseudodiffusion, D* and perfusion fraction, f).1 The IVIM method has largely been accepted in the abdomen, 2 but applications in the brain and in paediatrics have not been explored to a great extent. 3 Therefore, the aim of this study was to evaluate the appropriateness of the fitting methods (Fig. 1) in terms of the degree of bi-exponential behaviour and the signal-to-noise ratio (SNR) with IVIM parameters derived from normal brain and tumours. A comparison to DSC-MRI derived perfusion parameters was used to verify the physical origins of the IVIM parameters.

Methods

The IVIM and DSC data analysis was computed using in-house Python software (Anaconda, Continuum Analytics, v.2.7.10) and the statistical analysis in SPSS Statistics (IBM, v.22). For IVIM model simulations and patient data, non-linear least-squares minimisation was performed using the Levenberg-Marquardt algorithm. The bi-exponential fitting methods varied from a non-constrained simultaneous fitting to a more constrained step-wise fitting (Fig.1). The IVIM grey matter (GM) and tumour model data were created using IVIM parameters derived from the relevant ROIs and with the same b-value distribution as used for the patient imaging. Random Gaussian noise was added to the model data to mimic SNR levels of 10-70.

Patient data (6 brain tumour patients aged 1-10) was acquired on a Philips Achieva 3T TX MRI scanner at the Birmingham Children’s Hospital using 32-multichannel receiver head coil. The DW-MRI sequence used a sensitivity-encoded (SENSE) approach with the following parameters: 11 exponentially spaced b-values (0-1000 s mm-2) in three orthogonal directions, TR/TE 4,000/91 ms, FOV 240x240, acquisition matrix 96x96, 30 slices with thickness of 3.5 mm and in-plane resolution 2.5x2.5 mm2. The scan duration was 2.12 minutes. The DSC-MRI used a protocol described previously, as well as the computation of cerebral blood flow (CBF), cerebral blood volume (CBV) and mean transit time (MTT). 4 ROIs were drawn manually on co-registered T2-weighted images for healthy-appearing GM and tumours and transferred to the perfusion maps for correlation analysis (Spearman correlation coefficient, ρ).

Results

The data simulation results are shown in Fig.2 and Table 1. The accuracy was measured using the theoretical IVIM value and the mean value from 1000 data iterations and the precision in terms of coefficient of variation. In the realistic SNRb1000 of 30 3, the constrained 1-parameter fitting was found to produce the overall most accurate and precise IVIM parameters f and D* with average error/CV% 11.4/77.6% and 37.6/69.9 % in the low-perfusion regime and 16.4/35.8% and 3.33%/39.7% in the high-perfusion regime, respectively.

Significant voxel-wise correlations were observed in the GM between the IVIM-f and DSC-CBV (ρ = 0.271-0.588, P <0.01), IVIM-fD* and DSC-CBF (ρ = 0.302-0.543, P <0.01), respectively. The correlation between the IVIM-D* and DSC-MTT was not significant (ρ = 0.024-0.162, P >0.05). The voxel-wise correlations in the tumours were found more variable with only a few cases showing any significant correlation (f-CBV ρ = 0.024-0.154, D*-MTT ρ = 0.009-0.388, fD*-CBF ρ = 0.031-0.434). Relative mean (mean tumour/mean GM) correlations were also computed for the perfusion parameters (Fig.4). Significant correlation was observed between the IVIM-f and DSC-CBV parameters, using both 1-and 2-parameter fitting. Strong correlations were also observed between the IVIM-fD* and DSC-CBF.

Discussion

The simulations suggest that the IVIM-f is robust enough to provide reliable results for low-perfused tumours and GM. The IVIM-D* was found to have limited robustness for the tumour model, with noticeable higher variance compared to IVIM-f (Fig.2). Overall, the 1-parameter fitting was found to be the most robust in terms of accuracy and precision, with the smallest number of outliers (Table 1).

The strong correlation of IVIM-f and DSC-CBV confirms the perfusion related origins of the f-parameter and further confirms the robustness of the 1-parameter fitting (Fig.4 and 5). The correlations between IVIM-D*, fD* and DSC-CBF, MTT, respectively, were likely reduced due to the limited robustness of IVIM-D* fitting as observed in the simulations. The IVIM-D* and DSC-MTT were found to correlate for the younger cohort (ρ = 0.800, P <0.05), but an outlier case (age 10) was found to reduce the correlation significantly. A larger cohort with a range of ages is required to further investigate the effect of age on perfusion.

Conclusion

The IVIM-f parameter using the 1-parameter fitting was found to provide a robust measure of CBV in GM and low-perfused tumours in this paediatric cohort. With anti-angiogenic treatment being increasingly used in these brain tumours, IVIM-f could provide a contrast-free biomarker for assessing these tumours.

Acknowledgements

EM gratefully acknowledges financial support from the EPSRC through a studentship from the PSIBS Doctoral Training Centre (EP/F50053X/1). AP holds an NIHR Research professorship. JN and SW receive funding from Free Radio in conjunction with Help Harry Help Others. The work was performed in the NIHR 3T MR Research Centre.

References

1. Le Bihan D. Intravoxel Incoherent Motion Perfusion MR Imaging: A Wake-Up Call. Radiology. 2008;249(3): 748-52.

2. Cohen AD, Schieke MC, Hohenwalter MD, et al. The Effect of Low b-Values on the Intravoxel Incoherent Motion Derived Pseudodiffusion Parameter in Liver. Magn Reson Med. 2015;73(1):306-11.

3. Wu WC, Chen YF, Tseng HM, et al. Caveat of measuring perfusion indexes using Intravoxel incoherent motion magnetic resonance imaging in the human brain. Eur Radiol. 2015;25(8):2485-92.

4. Withey, SB, Novak J, Peet, A, et al. Arterial input function and gray matter cerebral blood volume measurements in children. J Magn Reson Imaging. 2015;00(0):000-000.

Figures

Fig. 1 Flow chart describing the different bi-exponential IVIM fitting methods used in this study. The equation parameters S(b)/S(0), D, D* and f correspond to normalised signal ratio, tissue diffusion coefficient, pseudodiffusion coefficient and perfusion fraction, respectively.

Fig. 2 IVIM simulation results with tumour model (a-b) and GM model (c-d) with theoretical values shown as dashed line. The IVIM D, D* and f for tumour model were 1.63x10-3 mm s-1, 7.23x10-3 mm s-1 and 0.0953 and for GM 8.32x10-4 mm s-1, 2.68x10-2 mm s-1 and 0.115, respectively.

Table 1. The coefficient of variation (CV%) results for the data simulations using GM and tumour model and the corresponding number of outliers using a 30 % least-squares fitting threshold. The results are shown for all three IVIM fitting methods.

Fig. 4 Correlation plots comparing mean relative (i.e. tumour/grey matter) ROI values of (a) DSC-CBV with IVIM-f and (b) DSC-CBF with relative IVIM-fD*. Spearman’s correlation coefficient (ρ) are reported for 1-parameter (ρ1) and 2-parameter (ρ2) IVIM fitting.

Fig. 5 Metastatic optic pathway glioma seen on axial T2-weighted image (a) and the parameter maps of IVIM-f (b), IVIM-fD* (c), DSC-CBV (d) and DSC-CBF (e) showing the low-perfused tumour region.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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