Taejoon Eo1, Dosik Hwang1, and Jinseong Jang1
1Yonsei University, Seoul, Korea, Democratic People's Republic of
Synopsis
The multi-echo SWV with the proposed complex signal
modeling method can provide high-SNR and multi-contrast phase masks and SWV
images. The multiplication number of the phase mask for SWV was increased up to
16 without image degradation even at the long TE of 49.8 ms. More detailed vein
structures were visualized with higher- and multiple contrasts than the
conventional single-echo GRE SWV.Introduction
Magnetic resonance (MR) susceptibility weighted
venography (SWV) is an imaging technique which provides high-contrast vein
structures, with little radiation exposure to patients, unlike other imaging
techniques such as X-rays and computed tomography (CT). In the SWV technique,
magnitude and phase data decomposed from complex MR raw data are combined with
each other to improve the contrast of visible veins. However, a low-SNR problem
distinct in the phase data hinders visualizing low-contrast and fine vein
structures from SWV images and has limited the multiplication number of a phase
mask to less than four. [1] Efforts to improve SNR of phase data were
previously made such as by using a linear phase model in temporal domain for
multi-echo MR images. [2] However, it is extremely difficult to unwrap the
phase at long echo times (
TEs) correctly
before fitting with linear phase model due to high noise which alters phase up
to 180° on some cases. The inaccurate phase unwrapping
results in a serious problem making many scattered points just like noise in
the phase masks and corresponding SWV images. In this study, we propose a
complex signal modeling method for multi-echo MR images which does not need phase
unwrapping. This method can significantly improve SNR of the phase data without
any other artifacts or noise-like scattered points. High-SNR and multi-contrast
SWV images were successfully produced with high visibility of detailed vein
structures, some of which were not visible in the conventional single-echo SWV
images.
Methods
For in vivo
experiments, a normal brain was scanned by a multi-echo gradient-recalled-echo (MGRE)
sequence using a 3T SIEMENS MRI system (Erlangen, Germany).
The parameters were the first echo time (TE1)=5.67ms, echo spacing (ES)=5.51ms, repetition time (TR)=95ms, flip angle (FA)=27°, slice thickness=1.6mm,
bandwidth=444 Hz/Px, field of view (FOV)=215×215×51.2mm3, the
number of echoes=16, the number of slices=32, matrix size=1024×1024×32×16 and in-plane
resolution=0.21×0.21mm2. The modeled phase $$$\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)$$$ used for fitting in the previous study [2] is represented
as:$$\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)=\omega\left(\overrightarrow{r}\right){TE}_{i}+{\varphi}_{0}\left(\overrightarrow{r}\right)$$
where
$$$\overrightarrow{r}$$$ is a position of a pixel, $$${TE}_{i}$$$
is the ith
TE,
$$$\omega\left(\overrightarrow{r}\right)$$$ is the rate of phase change with time of pixel
$$$\overrightarrow{r}$$$ and
$$${\varphi}_{0}\left(\overrightarrow{r}\right)$$$ is the phase at TE=0 ms of pixel
$$$\overrightarrow{r}$$$.
Then the following minimization equation is solved using a least squares (LS) algorithm
to denoise the measured phase signal.$$\min_{\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)}{\sum_{i=1}^{N}{{\left\{{\varphi}_{u,m}\left(\overrightarrow{r},{TE}_{i}\right)-\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right){e}^{i\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)}\right\}}^{2}}}\\\xrightarrow{\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)=\omega\left(\overrightarrow{r}\right){TE}_{i}+{\varphi}_{0}\left(\overrightarrow{r}\right)}\min_{\omega\left(\overrightarrow{r}\right),{\varphi}_{0}\left(\overrightarrow{r}\right)}{\sum_{i=1}^{N}{{\left\{{\varphi}_{u,m}\left(\overrightarrow{r},{TE}_{i}\right)-\left(\omega\left(\overrightarrow{r}\right){TE}_{i}+{\varphi}_{0}\left(\overrightarrow{r}\right)\right)\right\}}^{2}}}$$
where
N is the number
of echoes,
$$${\varphi}_{u,m}\left(\overrightarrow{r},{TE}_{i}\right)$$$
is the unwrapped phase of the measured phase
of pixel
$$$\overrightarrow{r}$$$ at
$$${TE}_{i}$$$. However,
$$${\varphi}_{u,m}\left(\overrightarrow{r},{TE}_{i}\right)$$$ has to be unwrapped correctly. Otherwise, large
errors caused in
$$$\omega\left(\overrightarrow{r}\right)$$$ and
$$${\varphi}_{0}\left(\overrightarrow{r}\right)$$$ due to the inaccurate phase unwrapping introduce
scattered artifacts over phase masks and SWV images. To eliminate the phase
unwrapping procedure, the proposed complex signal modeling was used, whose corresponding
minimization formula is as follows:$$\min_{\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)}{\sum_{i=1}^{N}{{\left\{{S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)-{\left|{S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)\right|}_{d}{e}^{i\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)}\right\}}^{2}}}\\\xrightarrow{\hat{\varphi}\left(\overrightarrow{r},{TE}_{i}\right)=\omega\left(\overrightarrow{r}\right){TE}_{i}+{\varphi}_{0}\left(\overrightarrow{r}\right)}\min_{\omega\left(\overrightarrow{r}\right),{\varphi}_{0}\left(\overrightarrow{r}\right)}{\sum_{i=1}^{N}{{\left\{{S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)-{\left|{S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)\right|}_{d}{e}^{i\left(\omega\left(\overrightarrow{r}\right){TE}_{i}+{\varphi}_{0}\left(\overrightarrow{r}\right)\right)}\right\}}^{2}}}$$
where
$$${S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)$$$
is the measured complex value of $$$\overrightarrow{r}$$$ at $$${TE}_{i}$$$ and
$$${\left|{S}_{m}\left(\overrightarrow{r},{TE}_{i}\right)\right|}_{d}$$$
is the denoised magnitude value of $$$\overrightarrow{r}$$$ at $$${TE}_{i}$$$ . The used denoising method for magnitude data was the
model-based denoising method using multiple T2(*)
compartments intrinsic in a temporal decay signal of each pixel. [3] The final
high-quality phase masks were generated from the denoised phase images by the
proposed complex signal modeling. 128×128 hamming filter and threshold value of 0.2π were used for
the generation of phase mask. Finally, high-SNR multiple SWV images were obtained
by merging the denoised phase masks and magnitude images at all TEs.
Results
Fig. 1 shows the phase mask
4 images and SWV images
obtained with the conventional single-echo GRE (a-e), the MGRE with the linear
phase model (f-m) and the MGRE with the proposed complex signal model (n-u). The
magnitude images for the both cases of MGRE were denoised using the model-based
denosing method. Scattered noise-like artifacts largely occurred in the
red-circled areas in (h). The degree of these scattered artifacts increased as
M and TE increased. On the other
hand, the denoised images with the proposed method do not such artifacts, and provide
clear vein structures with high SNR even when M is 16 or
TE is long(49.8ms)(p,s,t,u). The final denoised SWV images
with the proposed method (r,s,t,u) successfully visualized more vein
structures with high visibility than the SWV images with the conventional
single-echo GRE (d,e).(The total scanning time was almost the same for both
GRE and MGRE acquisitions)
Conclusion
The multi-echo SWV with the proposed complex signal
modeling method can provide high-SNR and multi-contrast phase masks and SWV
images. The multiplication number of the phase mask for SWV was increased up to
16 without image degradation even at the long
TE of 49.8ms. More detailed vein
structures were visualized with higher- and multiple contrasts than the
conventional single-echo GRE SWV.
Acknowledgements
This research was
supported by NRF-2011-0025574.References
[1]E.M.Haacke,et al,AJNR Am J Neuroradiol 2009;30:19-30. [2]U.Jang,et al,Neuroimage 2013;70:308-316. [3]U.Jang,et al,Med Phys 2012;39(1):468-474.