Incorporation of Nonzero Echo Times in the SPGR and bSSFP Signal Models used in mcDESPOT
Mustapha Bouhrara1 and Richard G. Spencer1

1NIA, NIH, Baltimore, MD, United States

Synopsis

Formulations of the two-component spoiled gradient recalled echo (SPGR) and balanced steady-state free precession (bSSFP) models that incorporate nonzero echo time (TE) effects are presented in the context of mcDESPOT and compared with the conventionally used SPGR and bSSFP models which ignore nonzero TEs. Relative errors in derived parameter estimates from conventional mcDESPOT, omitting TE effects, are assessed using simulations over a wide range of experimental and sample parameters. The neglect of nonzero TE leads to an overestimate of the SPGR and an underestimate of the bSSFP signals. These effects introduce large errors in parameter estimates derived from conventional mcDESPOT.

Target Audience:

Scientists interested in the Multi-component Driven Equilibrium Single Pulse Observation of T1 and T2 (mcDESPOT) approach to tissue analysis

Purpose:

Combining spoiled gradient recalled echo (SPGR) and balanced steady state free precession (bSSFP) imaging sequences, as in mcDESPOT (1-2), results in relatively high signal-to-noise ratio (SNR) and rapid image acquisitions. This facilitates mapping of component fractions and corresponding relaxation times. However, the magnetization relaxation that occurs between the pulse preceding signal acquisition and the acquisition itself is neglected in the current treatments of mcDESPOT; that is, nonzero TE effects are neglected in the analysis of both the SPGR and bSSFP signals. Here, we present formulations of the SPGR and bSSFP models that account for nonzero TEs. Numerical simulations are presented to determine the impact of neglecting nonzero TEs on derived parameter estimates from conventional mcDESPOT.

Theory:

Under conditions of chemical exchange equilibrium between two pools representing respectively a slowly relaxing T2 species, S, and a fast-relaxing species, F, the steady-state (SS) magnetization, MSS, immediately preceding each radio-frequency (RF) pulse in a SS sequence is given by

$$\it \mathbf{M}^{SS}=\left(\begin{array}{c}\mathbf{I-\exp\left(\begin{array}{c}\mathbf{A}\cdot\mathit{TR}\end{array}\right)}\mathbf{R}\left(\begin{array}{c}\alpha\end{array}\right)\end{array}\right)^{-1} \left(\begin{array}{c}\mathbf{\exp\left(\begin{array}{c}\mathbf{A}\cdot\mathit{TR}\end{array}\right)-I}\end{array}\right)\mathbf{A}^{-1}\mathbf{C}, [1]$$,

with C = f(M0, fF, fS, T1,F, T1,S) and A = f(T1,F, T1,S,T2,F, T2,S, kSF, kFS, θRF, Δω, TR), where M0 is the signal amplitude at TE = 0 ms, TR is the repetition time, θRF is the phase increment of the excitation pulse, α is the flip angle (FA), fF and fS are the fractions of the fast and slow components, respectively, kSF and kFS are the exchange rates between pools, and Δω is the off-resonance frequency. R(α) is a rotation matrix about the RF axis and I is the identity matrix.

In the conventional implementation of mcDESPOT (1-2), the two-component bSSFP signal is taken as

$$S_{Conv}^{SS}=\mid(M_{x,S}^{SS}+M_{x,F}^{SS})+i(M_{y,S}^{SS}+M_{y,F}^{SS})\mid. [2]$$

However, Eqs. 1-2 do not account for the relaxation occurring between the excitation pulse and the subsequent acquisition (3) that occurs at TEbSSFP = TRbSSFP/2. The corrected bSSFP magnetization incorporating relaxation time is given by:

$$\it \mathbf{M}_{Corr}^{bSSFP}=\exp\left(\begin{array}{c}\mathbf{A^*}\cdot\mathit{TE_{bSSFP}}\end{array}\right)\mathbf{R}\left(\begin{array}{c}\alpha\end{array}\right)\mathbf{M}^{SS}+\left(\begin{array}{c}\exp\left(\begin{array}{c}\mathbf{A^*\cdot\mathit{TE_{bSSFP}}}\end{array}\right)-\mathbf{I}\end{array}\right)\mathbf{A^*}^{-1}\mathbf{C}, [3]$$

where A* is similar to A but with TR replaced by TEbSSFP. The corrected bSSFP signal is given by:

$$S_{Corr}^{bSSFP}=\mid(M_{Corr,x,S}^{bSSFP}+M_{Corr,x,F}^{bSSFP})+i(M_{Corr,y,S}^{bSSFP}+M_{Corr,y,F}^{bSSFP})\mid. [4]$$

Similarly, for spoiled SS (SSS) transverse magnetization, MSSS, as in the case of SPGR, the magnetization immediately following each RF pulse is given by:

$$\it \mathbf{M}^{SSS}=\sin\alpha\left(\begin{array}{c}\mathbf{I-\exp\left(\begin{array}{c}\mathbf{B}\cdot\mathit{TR_{SPGR}}\end{array}\right)\cos\alpha}\end{array}\right)^{-1} \left(\begin{array}{c}\mathbf{I-\exp\left(\begin{array}{c}\mathbf{B}\cdot\mathit{TR_{SPGR}}\end{array}\right)}\end{array}\right)\mathbf{D}, [5]$$

with D = f(M0, fF, fS) and B = f(T1,F, T1,S, kSF, kFS). In the conventional mcDESPOT, the two-component SPGR signal is taken as

$$S^{SSS}=\mid{M_{z,S}^{SSS}+M_{z,F}^{SSS}}\mid. [6]$$

However, Eqs. 5-6 must be modified to account for relaxation between the excitation and acquisition; the corrected SPGR magnetization is described by:

$$\it \mathbf{M}_{Corr}^{SPGR}=\exp\left(\begin{array}{c}\mathbf{A}\cdot\mathit{TE_{SPGR}}\end{array}\right)\mathbf{R}\left(\begin{array}{c}\alpha\end{array}\right)\mathbf{S}\mathbf{M}_{Corr}^{SSS}+\mathbf{S}\left(\begin{array}{c}\exp\left(\begin{array}{c}\mathbf{A\cdot\mathit{TE_{SPGR}}}\end{array}\right)-\mathbf{I}\end{array}\right)\mathbf{A}^{-1}\mathbf{C}, [7]$$

where S is a spoiler matrix and $$$\it \mathbf{M}_{Corr}^{SSS}= \left(\begin{array}{c}\mathbf{I}-\mathbf{R}\left(\begin{array}{c}\alpha\end{array}\right)\exp\left(\begin{array}{c}\mathbf{A}\cdot\mathit{TR_{SPGR}}\end{array}\right)\mathbf{S}\end{array}\right)^{-1}\mathbf{S}\left(\begin{array}{c}\left(\begin{array}{c}\exp\left(\begin{array}{c}\mathbf{A\cdot\mathit{TR_{SPGR}}}\end{array}\right)-\mathbf{I}\end{array}\right)\mathbf{A}^{-1}\mathbf{C}\end{array}\right)$$$, from which the corrected SPGR signal is given by:

$$S_{Corr}^{SPGR}=\mid(M_{Corr,x,S}^{SPGR}+M_{Corr,x,F}^{SPGR})+i(M_{Corr,y,S}^{SPGR}+M_{Corr,y,F}^{SPGR})\mid. [8]$$

Methods:

Effects of nonzero TESPGR: Corrected SPGR signals were simulated for values of TESPGR ranging from 0.5 to 6 ms in 0.25 ms increments (Eq. 8), and corrected bSSFP signals were generated with TEbSSFP = 3.5 ms and θRF = 0 or π (Eq. 4). Signals were generated for values of fF ranging from 0.025 to 0.5 in increments of 0.025. For each TESPGR and fF combination, corrected SPGR and bSSFP signals were then fitted simultaneously to the corrected models (Eqs. 8 and 4), explicitly accounting for nonzero TEs (TEC-mcDESPOT), or to the conventional models (Eqs. 6 and 2), neglecting nonzero TEs (Conventional mcDESPOT).

Effects of nonzero TEbSSFP: Corrected SPGR signals were simulated with a fixed TESPGR value of 2 ms. Corrected bSSFP signals were generated for values of TEbSSFP ranging from 1.5 to 6 ms in 0.25 ms increments and for θRF = 0 or π. Corrected SPGR and bSSFP signals were generated for values of fF ranging from 0.025 to 0.5 in increments of 0.025. For each TEbSSFP and fF combination, corrected SPGR and bSSFP signals were then fitted simultaneously to the corrected models (TEC-mcDESPOT), or to the conventional models (Conventional mcDESPOT).

Results and Discussion:

Figs.1-2, top rows, show that data simulated with nonzero TEs and fit with TEC-mcDESPOT provide true input values for all parameters; this indicates stability of the fitting procedure. In contrast, when the signals were fitted with Conventional-mcDESPOT, significant errors in all derived parameter estimates were observed. In fact, neglect of nonzero TEs leads to signal models that overestimate SPGR and underestimate bSSFP signal intensities. This results in substantial errors in all mcDESPOT-derived parameter estimates.

Conclusions:

We have shown that neglect of nonzero relaxation times can result in substantial errors in mcDESPOT-derived parameter estimates and propose the use of the SPGR and bSSFP signal models described herein for quantitative analyses using mcDESPOT.

Acknowledgements

This research was supported entirely by the Intramural Research Program of the NIH, National Institute on Aging.

References

[1] Deoni SCL et al. MRM 2008;60:1372-1387. [2] Deoni SCL. MRM 2011; 65:1021-1035. [3] Scheffler K, Lehnhardt S. Eur Radiol 2003;13:2409-2418.

Figures

Fig.1. Relative error (100*|Pest - P|/P, where Pest and P are the estimated and true parameter values, respectively) maps obtained from fitting simulated data with TEC-mcDESPOT or conventional mcDESPOT signal models for different combinations of TESPGR and fF. Input parameters: TEbSSFP=3.5ms, fF=0.2, T2,F=10ms, T2,S=90ms, T1,F=450ms, T1,S=2000ms, kFS=kSF=0ms-1, Δω=0Hz, αSPGR={2,4,6,8,10,12,14,16,18,20} and αbSSFP={2,6,14,22,30,38,46,54,62,70}.

Fig.2. Relative error maps obtained from fitting simulated data with TEC-mcDESPOT or conventional mcDESPOT signal models for different combinations of TEbSSFP and fF. The other experimental and input parameters were identical to those noted in the legend of Fig.1.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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