A Shinnar Le-Roux Transform for T1, T2 and Frequency Selective Pulses
Frank Ong1 and Michael Lustig1

1Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley, CA, United States

Synopsis

We propose a generalized Shinnar-Le-Roux transform that maps $$$T_1$$$, $$$T_2$$$ and frequency selective pulses to multi-dimensional polynomials. We show that the polynomial mapping is one-to-one and hence designing these RF pulses reduces to multi-dimensional polynomial design. We describe a convex approach to the multi-dimensional polynomial design and show preliminary $$$T_2$$$ and frequency selective pulses.

Purpose

To extend the Shinnar-Le-Roux (SLR) algorithm for designing joint $$$T_1$$$, $$$T_2$$$, and frequency selective RF pulses.

Introduction

Designing radio frequency pulses is in general a non-linear problem. The SLR transform1,2 introduces a one-to-one mapping between frequency selective pulses to polynomials and hence allows us to design frequency selective pulses using linear filter design tools. Recently, Logi et al.3 further extends the SLR transform to $$$T_2$$$ selective pulses. In this work, we propose a generalization of the SLR transform and map a joint $$$T_1$$$, $$$T_2$$$ and frequency selective pulse to multi-dimensional polynomials. This enables us to create $$$T_1$$$, $$$T_2$$$ and frequency selective pulses using convex optimization filter design tools.

RF pulses to polynomials

For illustration, we focus on the case where $$$T_1$$$ can be neglected. Derivation with $$$T_1$$$ is shown in figures.

To account for $$$T_1$$$ and $$$T_2$$$, we consider the standard representation of magnetization $$$(M_{xy}, M_{z})$$$ instead of spinors. We assume the hard pulse model (Figure 1), where the RF pulse is parametrized by hard pulse flip angle magnitude $$$\theta_n$$$ and phase $$$\phi_n$$$ with spacing $$$\Delta t$$$ for free precession, $$$T_2$$$ decay, and $$$T_1$$$ recovery. We define $$$z_2$$$ to be $$$\exp(\Delta t/T_2+i2\pi f\Delta t )$$$. Then, expanding the forward equation in Figure 1 recursively, we can express the magnetization after the $$$n$$$th hard pulse as: $$M_{xy,n}(z_2,z_2^*)=\sum_{i+j\le n}b_n{[i][j]}~z_2^{-i}{z^*_2}^{-j}\\M_{z,n}(z_2, z_2^*)=\sum_{i + j\le n}a_n{[i][j]}~z_2^{-i}{z^*_2}^{-j}\\$$ Moreover, these polynomials satisfy constraints that are invariant to the RF pulse: Since $$$M_{z,n}$$$ is real, $$$a_n[i][j]=a^*_n[j][i]$$$. The polynomials can also be verified to satisfy: $$\Re[ M_{xy,n}(z_2, z_2^*)M^*_{xy,n} (1/z_2^*, 1/z_2)]+M_{z,n}(z_2, z_2^*)M_{z,n}(1/z_2^*, 1/z_2)=1$$ which reduces to the original SLR energy conservation constraint $$$(|M_{xy,n}|^2 +|M_{z,n}|^2=1)$$$ when $$$T_2$$$ is neglected.

Polynomials to RF pulses

More importantly, any pair of two-dimensional polynomials that satisfies the invariant constraints can be mapped back to a $$$T_2$$$ and frequency selective pulse. In particular, if we go though the inverse equation in Figure 2, each polynomial must reduce its degree by one. By matching with the invariant constraints, one unique hard pulse angle can be found to reduce the polynomial degrees: $$\begin{pmatrix}\theta_n\\ \phi_n\end{pmatrix}=\begin{pmatrix}\tan^{-1}\left(\frac{|b_n{[0][0]}|}{a_n{[0][0]}}\right)\\ \angle\left(-ib_n{[0][0]}a_n{[0][0]}\right)\end{pmatrix}=\begin{pmatrix}\tan^{-1}\left(\frac{|2a_n{[0][n]}|}{|b_n[n][0]|-|b_n{[0][n]|}}\right)\\ \angle\left(ia_n{[0][n]}b_n[n][0]\right)\end{pmatrix}$$

Because of limited space, we omit the detailed derivation. By iterating through the inverse equations, we can show that there is a one-to-one mapping between a $$$T_2$$$ and frequency selective pulse and a pair of two-dimensional polynomials. A similar procedure can show that a $$$T_1$$$, $$$T_2$$$ and frequency selective pulse can be mapped one-to-one to three-dimensional polynomials, which are summarized in Figure 3.

Polynomial design via Convex Relaxation

We have now reduced the general pulse design to multi-dimensional polynomial design. However, one challenge is that multi-dimensional minimum phase decomposition does not exist and the invariant constraint becomes difficult to incorporate within the filter design. In this abstract, we consider a convex relaxation approach$$$^{4,5}$$$ as shown in Figure 4. However, more work is still needed to consistently design multi-dimensional polynomials.

Small tip angle region

We also consider the small-tip angle region, where $$$\sin^2( \theta_n / 2) \approx 0$$$. By propagating through the forward equation, the polynomial coefficients can be found to be mostly zeros, except $$$b_n[i][0]$$$, $$$a_n[i][0]$$$ and $$$a_n[0][j]$$$. Hence, the two-dimensional polynomials can be approximated as one-dimensional polynomials and the small-tip $$$T_2$$$ and frequency polynomial can be easily designed using the z-transform as shown in the results.

Results

Because of the complexity of designing multi-dimensional polynomials, we have only implemented our method successfully with small-tip $$$T_2$$$ and frequency pulses, where the design reduces to a one-dimensional z-transform. Figure 2a shows minimum phase TBW=6 pulses designed to excite a bandwidth of 600 Hz for $$$T_2$$$ = 10000 ms and $$$T_2$$$ = 1ms separately, with $$$\Delta t = 50 \mu s$$$ and $$$n=20$$$. Note that the z-transform of the short $$$T_2$$$ pulse shows how the polynomial compensates for the short $$$T_2$$$ by shifting the zeros to the left, which results in a sharp frequency selective profile. Figure 2b shows a minimum phase pulse designed to null $$$T_2 = 1 ms$$$ with frequency $$$= 0Hz$$$ and $$$=-100Hz$$$, using the proposed method with $$$\Delta T = 250 \mu s$$$ and $$$n=20$$$. Note that the z-transform of the polynomial shows that the zeros are placed exactly at the corresponding $$$z_2$$$ null points.

Acknowledgements

We thank the following funding sources: NIH Grants R01EB009690, Sloan Research Fellowship, Okawa Research Grant and the NSF graduate fellowship

References

[1] M. Shinnar, S. Eleff, H. Subramanian, and J. S. Leigh, “The synthesis of pulse sequences yielding arbitrary magnetization vectors.” Magnetic Resonance in Medicine, vol. 12, no. 1, pp. 74–80, Oct. 1989. [Online]. Available: http://onlinelibrary.wiley.com/doi/10.1002/mrm.1910120109/abstract

[2] J. Pauly, P. Le Roux, D. Nishimura, and A. Macovski, “Parameter relations for the Shinnar-Le Roux selective excitation pulse design algorithm,” IEEE Transactions on Medical Imaging, vol. 10, no. 1, pp. 53–65, 1991. [Online]. Available: http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=75611

[3] L. Vidarsson, C. Cunningham, G. E. Gold, and J. M. Pauly, “T2-Selective Magnetization Preparation Pulses,” IEEE Transactions on Medical Imaging, vol. 26, no. 7, pp. 981–989, Jul. 2007. [Online]. Available: http: //ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumber=4265756

[4] B. Dumitrescu, “Positive trigonometric polynomials and signal processing applications,” 2007. [Online]. Available: https://books.google.com/books?id=9gLXILJUm4QC

[5] E. J. Candes, Y. C. Eldar, T. Strohmer, and V. Voroninski, “Phase Retrieval via Matrix Completion,” SIAM Journal on Imaging Sciences, vol. 6, no. 1, pp. 199–225, Feb. 2013. [Online]. Available: http://epubs.siam.org/doi/abs/10.1137/110848074

Figures

Hard pulse model and equations for forward generation of magnetization.

Inverse equation to go from magnetization after the nth hard pulse to n-1

Summary of the Shinnar-Le Roux transform for T1, T2 and frequency selective pulse

Convex formulation for multi-dimensional polynomial design

(a) Minimum phase pulses with TBW=6 designed to excite a bandwidth of 600 Hz for T2=10000 ms and T2=1 ms.

(b) Minimum phase pulses design to null T2=1ms and frequency= 0Hz and -100Hz. The z-transform of the polynomial shows that the zeros are placed exactly at the corresponding null points




Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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