Rapid and continuous respiratory motion-resolved abdominal MRI using 3D golden-angle spiral projection acquisition
Mootaz Eldib1, Li Feng2, Daniel K Sodickson2, Zahi A Fayad1, and Hadrien A Dyvorne1

1Translational and Molecular Imaging Institute, Icahn school of Medicine at Mount Sinai, New York, NY, United States, 2Center for Advanced Imaging Innovation and Research (CAI2R), Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, United States

Synopsis

We propose a novel acquisition technique for motion-resolved abdominal imaging. Using a golden angle spiral projection trajectory, we were able to acquire reliable physiologic tracking data while acquiring 3D isotropic resolution images of the entire upper abdomen, resulting in an efficient self-gated sequence. We show that respiratory motion can be fully characterized in vivo in a minute-long 1.8 mm isotropic acquisition, which is suitable for applications such as PET/MR motion correction.

Introduction

Motion-resolved volumetric imaging (4D-MRI) has been an attractive research topic in the last several years. One important application with the recent introduction of simultaneous PET/MR imaging has been the use of 4D-MRI to generate a motion model, which is subsequently applied to correct for physiologic motion in the relativity low resolution PET data (1). For this application, a rapid, continuous and comprehensive 4D-MRI data acquisition is desirable, so that other clinically relevant images can be collected within the same imaging session (2). The current standard method utilizes a self-navigated stack-of-stars radial sequence (1, 3). However this approach suffers from limited spatial coverage along the partition direction and relatively long acquisition time (~10 min). In this study, we developed, implemented, and tested a novel self-navigated 3D spiral sequence that provides higher design flexibility and faster acquisition speed for respiratory motion correction. With this new acquisition scheme, respiratory motion-resolved images covering the entire abdomen with 1.8 mm isotropic resolution could be obtained in only 1:12 min.

Methods

Sequence design: A 3D golden-angle spiral projection gradient echo sequence that enables capture of respiratory motion along the foot-head (F-H) direction was designed to acquire MR images covering the entire upper abdominal volume with isotropic resolution. Multishot 2D spirals (N=21 shots, spherical field of view 350 mm, 1.8 mm isotropic resolution, readout duration 4.5 ms per arm) were acquired continuously with increment of the azimuthal angle of the projection along the F-H axis (Fig. 1). Golden-angle increments were employed in order to ensure good k-space distribution in the subsequent motion sorting procedure, similar to previous approaches (4). With this hybrid spiral projection sampling scheme, each 2D readout yields a projection plane along the principal motion axis acquired at a fast rate (214 ms), while the complete 3D acquisition yields isotropic depiction of the full abdominal volume, which can be retrospectively sorted in into distinct respiratory motion states using the motion signal extracted from the acquired data.

In vivo MR imaging: The sequence designed above was tested on healthy volunteers who gave informed consent. Imaging was performed on a 3.0-T clinical scanner (Skyra, Siemens Healthcare, Erlangen) equipped with spine and body matrix coil and 40 mT/m, 180 mT/m/ms gradient sets with the following parameters: TR/TE=10.2/0.7 ms, flip angle=10o. The volunteers were instructed to breathe freely during the entire scan and the acquisition time for the 3D spiral projection sequence was 1:12 min including 333 projections. Fat suppression was performed using 1-1 binomial pulses. The RF pulse selected a 300 mm-thick sagittal slab including all abdominal organs and excluding the volunteer’s arms.

Image reconstruction: 1D projection profiles were first generated by summing each 2D spiral projection plane along the foot-head axis, and respiratory motion was then derived from the 1D projection profiles from a coil-element that is close to the diaphragm. The self-navigation trace was extracted using 3 different methods: (i) 1D image registration using the log difference as similarity metric, (ii) center of mass, and (iii) by computing the 1st principle component in the time domain. The k-space data were sorted into 7 different respiratory bins and each bin was reconstructed separately using the non-Cartesian conjugate gradient-SENSE (CG-SENSE). Reconstruction time was about 10 min per bin on a Linux server running Matlab. A CUDA-accelerated nonuniform FFT toolbox was used for gridding operation (5).

Results

Figure 2 shows high quality projection profiles that provide sufficient repetition rate to capture respiratory motion. Among the three motion extraction algorithms, the registration approach provided the most reliable tracking of respiratory motion signal, comparing to the true displacement values in the projection profiles. Figure 3 shows a reformatted 3D dataset reconstructed using 35 projections at end expiratory phase. The CG-SENSE method leads to improved image quality with notable reduction of streak artifacts, which are present in the direct reconstruction. Figure 4 compares the averaged reconstruction with the motion-resolved reconstruction at end-inspiration and end-expiration states. Motion sorting leads to reduction of overall blurring. Signal intensity profiles taken along the liver-lung interface show respiration-related displacements of order 10-15 mm, which is consistent with previously reported values.

Conclusion

Our new acquisition approach that utilizes a hybrid spiral projection trajectory enables reliable tracking of physiological motion and efficient motion-resolved imaging of the whole abdominal volume with 1.8 mm isotropic resolution in 1:12 min scan time. Such a fast acquisition can provide comprehensive models for PET motion correction without affecting routine clinical workflow.

Future work includes evaluating this technique for cardiac motion estimation, as well as improving image reconstruction using multi-dimensional compressed sensing techniques (4).

Acknowledgements

NIH funding support: R00NS070821, R01HL071021 and P41EB017183. We thank Florian Knoll for providing the GPU nonuniform FFT reconstruction algorithms.

References

1. Furst S, Grimm R, Hong I, Souvatzoglou M, Casey ME, Schwaiger M, et al. Motion correction strategies for integrated PET/MR. J Nucl Med. 2015;56(2):261-9.

2. Manber R, Thielemans K, Hutton BF, Barnes A, Ourselin S, Arridge S, et al. Practical PET Respiratory Motion Correction in Clinical PET/MR. J Nucl Med. 2015;56(6):890-6.

3. Chandarana H, Block TK, Rosenkrantz AB, Lim RP, Kim D, Mossa DJ, et al. Free-breathing radial 3D fat-suppressed T1-weighted gradient echo sequence: a viable alternative for contrast-enhanced liver imaging in patients unable to suspend respiration. Invest Radiol. 2011;46(10):648-53.

4. Feng L, Axel L, Chandarana H, Block KT, Sodickson DK, Otazo R. XD-GRASP: Golden-angle radial MRI with reconstruction of extra motion-state dimensions using compressed sensing. Magn Reson Med. 2015.

5. Knoll FS, A,; Diwoky, C.; Sodickson DK. gpuNUFFT - An Open-Source GPU Library for 3D Gridding with Direct Matlab Interface. Proc ISMRM. 2014:4297

Figures

Figure 1: principle of the self-gated spiral projection acquisition. Left: k-space trajectory is a 2D spiral that is rotated at the golden angle around the foot-head axis (F-H). Right: schematic gradient readout waveforms. Every 2D projection consists of a 21-arms 2D spiral played out in 214 ms.

Figure 2: Left: coronal image from the receive coil used to extract respiratory traces. Right: projection profiles along the F-H direction. Motion estimation derived from profile analysis shows the robustness of the registration approach.

Figure 3: reconstruction of motion-sorted data at the end-expiration phase. Top: direct reconstruction results in severe artifacts due to the low number of 3D projections n=35. Bottom: image quality is recovered using non-Cartesian CG-SENSE reconstruction.

Figure 4: Comparison of image quality in axial and sagittal reformats from the averaged acquisition (all 333 projections) and the motion-resolved volumes at end inspiration and end expiration. Intensity profiles measured along the liver-lung interface are shown on the right.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
1841