Jingwei Zhang1,2, Dong Zhou2, Thanh Nguyen2, Pascal Spincemaille2, Ajay Gupta2, and Yi Wang1,2
1Biomedical Engineering, Cornell University, New York, NY, United States, 2Radiology, Weill Cornell Medical College, New York, NY, United States
Synopsis
This study proposed a new post-processing algorithm with preconditioning and physiological constraints for QSM based CMRO2 mapping, which eliminated physiologically impossible OEF values and improved the robustness of the technique. Reproducibility of the proposed method was examined. Feasibility of hyperventilation as a more efficient blood flow challenge was also investigated. Purpose
The quantitative mapping of cerebral metabolic rate of oxygen (CMRO2) and
oxygen extraction fraction (OEF) are important indicators for neural viability.
Since blood oxygen saturation is linearly related to its magnetic
susceptibility
1, CMRO2 and OEF
maps can be computed using quantitative susceptibility mapping (QSM) and cerebral
blood flow (CBF) acquired in two brain states, such as before and after a
caffeine challenge in healthy subjects
2. However,
there are two limitations regarding this approach: 1) noisy CMRO2 and OEF maps with extreme, physiologically impossible OEF values (>1 or <0) due to error
propagation. 2) ~30 minutes of waiting time for caffeine to exert its
vaso-constrictive effects; To overcome
these limitations we propose a new constrained optimization algorithm and to
use hyperventilation (HV) as an efficient vasoconstrictive for quantitative
CMRO2 mapping.
Methods
OEF maps can express as a function of CBF and susceptibility χ2:
$$$CMRO2=4SaO_2[Hb]CBF\cdot
OEF$$$
$$$OEF=\frac{1}{SaO_2}\left(\frac{\chi-\chi_{nb}-\chi_{a}}{CBV_v\psi_{hb}\left(\chi_{dHb}-\chi_{oHb}\right)}-\left(1-SaO_{2}\right)\right)$$$
Here, χnb is susceptibility
contributions from non-blood tissue sources. Other parameters are constant: SaO2
is arterial oxygen saturation; χa
is susceptibility
contributions from arterial blood; CBVv is the volume fraction of
venous blood in a voxel; ΨHb is the volume fraction of Hemoglobin
(Hb) within blood; χdHb and χoHb are the volume
susceptibilities of pure deoxyHb (dHb) and oxyHb (oHb), respectively.
The OEFs at baseline (OEFbase),
at challenge state (OEFchal), and χnb were organized into a vector of unknowns in a linear system Ax=b format. To reduce error
propagation in the solution, the system of equations were redefined as A* x*=b,
where A*=AP and x*=P-1 x. P is a
right preconditioner which scales the elements of x* to the same order of
magnitude. In addition a global
physiological constraint was imposed based on the expectation that the global
CMRO2 calculated from the CMRO2 map should be similar to that calculated from
global OEF estimated from susceptibility of venous blood in straight sinus. The
constrained solution x* was obtained by minimizing the following cost function
using a limited-memory Broyden–Fletcher–Goldfarb–Shanno-Bound (L-BFGS-B)
algorithm with physiological bounds on OEF between 0 and 1 over the whole brain. Summation index i is over
brain voxels.$$$x^{*}=argmin_{x^{*}}\left\{\parallel
A^{*}x^{*}-b\parallel _2^2+\lambda
\left(\left(\sum_iCBF_{base,i}OEF_{base,i}\right)-OEF_{base,vein}\sum_i
CBF_{base,i}\right)^2+\lambda
\left(\left(\sum_iCBF_{chal,i}OEF_{chal,i}\right)-OEF_{chal,vein}\sum_i
CBF_{chal,i}\right)^2\right\}$$$
MRI
was performed on healthy volunteers (n=11) before and during hyperventilation using a 3T
scanner and a protocol consisting of a 3D ASL and a 3D spoiled Gradient Echo (SPGR)
sequence. Total scan time was 15 minutes. The 3D ASL parameters were: 22cm FOV,
1500 ms labeling period, 1525 ms post-label delay, 3.5 mm isotropic resolution.
CBF maps (ml/100g/min) were generated from the ASL data using GE functool. The
3D SPGR parameters were: identical coverage as the ASL scan, 7 equally spaced echoes,
2.2 ms first TE, 30.8ms TR, 1.2 mm isotropic resolution. QSM generated from
magnitude and phase images using Morphology Enabled Dipole Inversion (MEDI)3,4. All images were
co-registered to the first QSM acquisition. The protocol
was repeated 30 min later for reproducibility study (HV2). Within a week
volunteers returned for an additional scan using caffeine as challenge with similar
protocol2.
The GM mask was generated
from T1 BRAVO images and further segmented into vascular territories (VT) for
ROI analysis. Paired t-test and bland-Altman was performed to analysis the
reproducibility of the method.
Results
Fig.1 compares maps generated by unconstrained and
constrained methods. Reduction in extreme values can be appreciated. Fig.2
compares maps generated with constraint method using caffeine and HV
challenges. The maps are visually comparable. Fig. 3 shows bland-Altman plots
comparing VT ROIs across all subjects between the two challenges, and between
the two HV scans. The comparisons show small (<10%) or statistically
insignificant bias.
Discussion
In this
work, we formulated a baysian approach to estimate CMRO2, which allows the use
of prior knowledge
such as physiological constraints to find a reasonable solution. Compared to unconstrained method, the proposed method eliminated physiologically impossible values and showed good reproducibility with small or statistically insignificant bias. Exam time for QSM CMRO2 also reduced by 4 folds (15 vs 60 minutes) when hyperventilation was used compared to caffeine while yielding visually comparable image.
Conclusion
The proposed algorithm eliminated physiologically impossible OEF values and showed good reproducibility. The study also suggests that hyperventilation is a more efficient vasoconstrictive challenge for QSM based CMRO2. Further investigation is warrant in patient cohort.
Acknowledgements
NIH grants: RO1 EB013443 and RO1 NS090464
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