Felipe Barreto1,2, Xiufeng Li1, Amir Moheet3, Anjali Kumar3, Lynn Eberly4, Elizabeth Seaquist3, Fabrizio Esposito5, and Silvia Mangia1
1CMRR, Department of Radiology, University of Minnesota, Minneapolis, MN, United States, 2Department of Physics, University of Sao Paulo, Ribeirao Preto, Brazil, 3Department of Medicine, University of Minnesota, Minneapolis, MN, United States, 4Division of Biostatistics, University of Minnesota, Minneapolis, MN, United States, 5Department of Medicine and Surgery, University of Salerno, Baronissi, Italy
Synopsis
The present study aimed at
characterizing the robustness of the default mode network (DMN) extracted at
single subject level from ASL datasets with independent component analysis. Three different analyses modes were considered, including the series of perfusion
weighted images, the full time series, and the pair-wise average of control/tag
images (pseudo-BOLD). Results show that the three analysis modes produce DMNs
with similar accuracy at a group level, but the pseudo-BOLD mode resulted in
smaller inter-subject variability of the spatial distribution of the single-subject
DMNs.Purpose
Arterial Spin Labeling
(ASL) methodologies are widely used to quantify cerebral blood flow in a wide range
of brain conditions.
1 Repeated measurements of control and tag
images are required due to the intrinsic low signal to noise ratio of the
technique; therefore a standard ASL acquisition requires at least 5 minutes.
Taking advantage of the acquisition duration, studies have shown the feasibility
of extracting resting state networks (RSNs) from such data sets.
2-3 Resting
state networks extracted from ASL data provide reduced yet still adequate
repeatability in their spatial pattern at a group level, but their robustness
in individual subjects has not been fully investigated yet. The purpose of this
study was to quantify the accuracy and the inter-subject reproducibility of one
particular RSN of interest, namely the default mode network (DMN), extracted at
a single subject level from ASL datasets with independent component analysis
(ICA). To this aim, we calculated the correlation coefficient between the z-scores
maps of individual subjects and the z-score map of an external template
obtained with BOLD-fMRI from a different group of healthy subjects. We also
evaluated the global z-score of each subject-map within the external template.
Finally, we optimized the number of IC components necessary for extracting the DMN
having the highest correlation with the external template in each subject.
Methods
ASL datasets were obtained within the context of a CBF study which recruited
so far 13 individuals with type 1 diabetes (6M/7F, 34.8±10.9 years). Data were
acquired using a 3T Siemens Prisma system and a pseudo-continuous ASL sequence.
Parameters were: TE/TR=14/5000 ms, labeling time/post labeling delay=1600/1600
ms, matrix of 70x70, FOV=210 mm, slice thickness=3 mm, 36 slices, gap of 3.6 mm
and 160 volumes. Subjects stayed awake with eyes closed during the experimental
session. We used BrainVoyagerQX (Brain Innovation, Maastricht, The Netherlands)
for slice scan time correction, motion correction, and normalization to Talairach
space. Analyses were performed on three different modes: perfusion weighted
images, dM (pairwise subtraction of control and tag images); full time series, FS;
pseudo-BOLD images (pair-wise average of control and tag images). Datasets were
high-pass filtered with a cut-off of 0.008 Hz, and spatially smoothed with a
Gaussian kernel of 6 mm. Multiple ICA runs were performed using ICASSO
4
with 10 repetitions in correspondence a variable number of independent
components (IC) ranging from 20 to 40 in steps of four. The external DMN
template served as input for a custom-built script that selected the most
similar IC map to the template based on the correlation coefficient between
voxel z-scores of each map and the template. The selected maps were visually
inspected and z-scores were extracted using a mask created from the external template
thresholded at z=2. Statistic summaries were finally obtained for each of dM,
FS and pseudo-BOLD modes.
Results and discussion
Visual inspection of the
DMNs extracted by ICA confirmed good spatial similarity with the external
template in 12, 10 and 9 out of 13 subjects for the pseudo-BOLD, FS and dM modes,
respectively. At a group level, the three analysis modes produced highly similar
DMN maps (Figure 1) and almost identical mean z-scores extracted from the external
DMN mask (Table 1). However, FS and pseudo-BOLD resulted in better
inter-subject reproducibility, with inter-subject deviations approximately 40%
smaller than those obtained with dM, potentially caused by the low pass
filtering effect induced by the 2-point averaging. The mean correlation
coefficients revealed that in average the accuracy of the individual DMNs
obtained with the three analysis modes were also very similar, but pseudo-BOLD produced
again smaller inter-subject deviations. The optimal number of ICs necessary to
produce the most robust DMN networks was slightly larger for the FS mode as
compared to the other analysis modes, possibly due to the extra variability
included by the labeling paradigm.
Conclusion
ASL datasets can be
effectively used to extract accurate DMNs on an individual subject basis. Among
the three analysis modes evaluated in this study, the pseudo-BOLD mode resulted
in smaller inter-subject variability of the spatial distribution of the DMNs.
Acknowledgements
NIH grants: P41 EB015894,
P30 NS076408, R01DK099137.References
[1] Alsop et al. Neuroimage 2015;73:102 [2] Zhu et al.
PLoS One 2013;8:e65884 [3] Jann et al. NeuroImage 2015;106:111 [4] Himberg et
al. NeuroImage 2004;22:1214.