Hoonjae Lee1,2 and Jaeseok Park3
1Center for Neuroscience Imaging Research (CNIR), Institute for Basic Science (IBS), Suwon, Korea, Republic of, 2Department of Brain and Cognitive Engineering, Korea University, Seoul, Korea, Republic of, 3Department of Biomedical Engineering, Sungkyunkwan University, Suwon, Korea, Republic of
Synopsis
In chemical exchange
saturation transfer (CEST) MRI, multiple acquisition of imaging data with
varying saturation frequencies is typically performed, which prohibitively
prolongs imaging time. Furthermore, conventional, subtraction-based MTR
asymmetry analysis is prone to substantial errors, because the z-spectrum is
convoluted by CEST as well as inherent asymmetric MT, nuclear Overhauser
enhancement (NOE), etc. To tackle these problems, in this work we propose a
new, model-based direct Extraction of the z-spectrum Asymmetry from
undersampled k-space using SYmmetric basis (k-EASY) that incorporates main
field inhomogeneity correction and z-spectrum asymmetry analysis into a
framework of compressed sensing.Purpose
Introducing a new, model-based
direct Extraction method of the z-spectrum Asymmetry from undersampled k-space
using SYmmetric basis (k-EASY), which is a compressed sensing approach to
accelerate z-spectrum acquisition while directly characterizing the signal
sources of the asymmetric z-spectrum.
Introduction
In chemical exchange
saturation transfer (CEST) MRI[1], multiple acquisition of imaging data with
varying saturation frequencies is typically performed[2], which prohibitively
prolongs imaging time. Furthermore, conventional, subtraction-based MTR
asymmetry analysis is prone to substantial errors, because the z-spectrum is
convoluted by CEST as well as inherent asymmetric MT, nuclear Overhauser
enhancement (NOE), etc. To tackle these problems, in this work we propose a
new, model-based direct Extraction of the z-spectrum Asymmetry from
undersampled k-space using SYmmetric basis (k-EASY) that incorporates main
field inhomogeneity correction and z-spectrum asymmetry analysis into a
framework of compressed sensing.
Methods
The z-spectrum in CEST MRI consists of
symmetric signal modulation with respect to the resonance frequency of water
due to direct water saturation and symmetric MT as well as asymmetric signal
modulation due to inherent asymmetric MT, NOE, and CEST, etc. In this work, we
propose a new, z-spectrum signal model consisting of symmetric and asymmetric
components under the assumption that main field inhomogeneities are corrected
in the z-spectral direction: $$$\mathrm{S=S_{sym}+S_{asym}+N}$$$, where S is a Casorati matrix of the total z-spectrum signal, Ssym is the symmetric component, Sasym is the asymmetric component, and N is additive noise. Since the aforementioned signal
model is highly underdetermined and Ssym and Sasym are somewhat correlated, the proposed z-spectrum decomposition
in undersampled k-space is performed by solving a constrained optimization
problem with the following priors: 1)Ssym is modeled by a product
of spatial coefficients (U) and temporal (V) basis (Ssym=UV), and the temporal
basis can be determined using the Bloch simulation model with only symmetric
signal pools taken into account, 2)the spatial coefficients are sparse in a transform
domain, 3) Sasym is highly spatiotemporally correlated($$$\mathrm{||S_{asym}||_*}$$$), and 4) Sasym results in an additional signal drop (saturation) in S ($$$\mathrm{S_{asym}<0}$$$). Given the considerations above, the proposed z-spectrum
decomposition in k-space is described by the following optimization problem:
$$\mathrm{\min_{S_{sym},S_{asym}}||d – F_u(φ(S_{sym}+S_{asym}))||_2^2+λ_S||ψ(U)||_1+λ_L||S_{asym}||_* \\ \text{subject to} \quad S_{sym}=UV, S_{asym}<0,}$$
where d is the measured data in k-space, φ represents the
two-step operator, phase modulation in the in-plane followed by B0 magnetic field modulation in the z-spectral direction, Fu is the undersampled Fourier transform, and ψ is the
sparsifying transform. It is assumed that phase modulation in the z-spectral
direction remains identical. Image phase and B0 magnetic field are used as prior information. Discrete wavelet transform is used as a
sparsifying operator, and spline interpolator is used as B0 field modulation operator. Symmetric basis, V, is extracted
from 10000 simulated z-spectra with only symmetric components taken into
account (Fig.1), and seven basis functions are then employed.
Experimental studies in creatine-agar phantom and brain were
performed on 3T (Siemens Trio), and imaging parameters were described in the
caption of the corresponding figures.
Results and Discussion
Figure 2 demonstrates
proposed method can generate same contrast when it is compared with
conventional MTR asymmetry analysis. Because there is no confounding asymmetry
component of frequency of interest, 2.0ppm in creatine-agar phantom, extracted
asymmetry of z-spectrum using proposed method, -Sasym, MTR asymmetry analysis of the extracted asymmetry, MTRasym(Sasym), and MTR asymmetry analysis of B0-corrected
z-spectrum, MTRasym(S), result in similar images. Especially, extracted asymmetry shows pure
CEST effect of target frequency and comparison of MTR asymmetry analysis of the
extracted asymmetry and B0-corrected z-spectrum shows accuracy of
reconstruction algorithm qualitatively. In creatine-agar
phantom, proposed method work properly even in high reduction factor (R=6). Figure 3 demonstrates
proposed method can separate out sources of conventional MTR asymmetry analysis
from undersampled CEST data. Especially in in-vivo CEST experiments, there is
confounding asymmetry effect on z-spectrum and it generates error in MTR
asymmetry analysis. According to the results of proposed method, in the
experiment setting, there is almost zero CEST effect at 3.5ppm and there is
large NOE or asymmetric MT effect at -3.5ppm, and it generates contrast of
conventional MTR asymmetry analysis. Figure 4 demonstrates that Sasym
in the proposed k-EASY method is highly sensitive to varying amplitudes of
saturating RF pulses.
Conclusion
We successfully
demonstrated that the proposed k-EASY method, which incorporates a novel
z-spectrum asymmetric analysis (EASY) into a framework of compressed sensing,
not only produces signal separation of CEST, inherent asymmetric MT, and NOE
directly from undersampled k-space but also makes it possible to achieve high
acceleration without apparent artifact and amplified noise, though its utility
in in vivo is to be further investigated in the future.
Acknowledgements
This work was supported
by IBS-R015-D1 and NRF(National Research Foundation of Korea) Grant funded by the Korean Government (NRF-2013-Global Ph.D. Fellowship Program).References
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