Tianyi Qian1, Yinyan Wang2,3, Kun Zhou4, Yuanyuan Kang4, Shaowu Li2,5, and Tao Jiang2,5
1MR Collaborations NE Asia, Siemens Healthcare, Beijing, China, People's Republic of, 2Neurosurgery, Tiantan Hospital, beijing, China, People's Republic of, 3Beijing Neurosurgical Institute, Capital Medical University, Beijing, China, People's Republic of, 4Siemens Shenzhen Magnetic Resonance Ltd., APPL, Shenzhen, China, People's Republic of, 5Beijing Neurosurgical Institute, Capital Medical University, beijing, China, People's Republic of
Synopsis
In this study, a new post-processing pipeline of resting-statefMRI (rs-fMRI)was
proposed for glioma grading, with the feasibility of extracting the timing
information of brain perfusion from BOLD signal. The blood arrival time
obtained from rs-fMRI shows unevenly distributed perfusion patterns in tumors. A
histogram-based analysis method was employed to analyze the non-uniform
distribution that could extract the patterns better than the routine method. The proposed pipeline was able to classify between low- and
high-grade gliomas.PURPOSE
Perfusion
patternsare important clinical indexes for glioma grading1.However, dynamic
susceptibility contrast MRrequires the use of exogenous contrast agents.As a
non-invasive method, resting-state fMRI (rs-fMRI) was used to identify
functional brain regions in brain malignancy lesions. By reflecting the oxygen
level in blood fluid, the signal of resting-state fMRI may be also associated
with the histopathological classification of the tumor and further guide the
adjuvant therapy of brain gliomas2.Here we demonstrate a new post-processing
pipeline of rs-fMRI applied for glioma grading, with the feasibility ofextracting
the timing information of brain perfusion from BOLD signal. Previous methods, based
on averaging theROI values,could notfully demonstrate the non-uniformed tumor
structure.As a consequence, a histogram-based analysis method was employed in
this study to extract the best perfusion patterns for glioma classification.
METHODS
A total
of 65 patients with histologically confirmed gliomas were included in this
study. The MRI exam consisted of both a routine pre-surgical protocol and rs-fMRI.
All data was collected on a MAGNETOMPrisma3T MR scanner (Siemens AG, Erlangen,
Germany). The parameters of rs-fMRI were as follows: TR=2500 ms, TE=30 ms, flip
angle=90°, 43 slices, slice thickness=3 mm, distance factor=20%, FOV=210 ×210
mm2, matrix= 70×70, measurements=100. The fMRI data was
pre-processed with a standard pipeline for resting-state data analysis, without
regressing out the global signal. After pre-processing, the blood arrival map was
obtained using the following steps: 1) Averaging the time series of the whole
brain to create the first time series template. 2) For each voxel, the time
course was shifted from -6TR to +6TR and correlated with the template at each
TR. Each voxel was then labeled as the number of TR thathad the maximal
correlation coefficient value. 3) Realigning the time series of all voxels
based on their relative blood arrivaltime determined by step2. 4) Averaging the
re-aligned time series of the whole brain to create a new global template. 5)
Repeating steps 2 and 3 until the number of voxel that had changed their blood
arrival value between two iterations is less than 100. The blood arrival time
of each subject wasthen converted to z-scores for group analysis.
Lesions
were manually identified by two neuroradiologists based on T2-weighted MR
images from each patient.Thehistogram pattern (HP)wasdefined as the probability
density distribution(pdf) of z-score within Lesion ROI after subtraction of the
pdf of the corresponding area in the other hemisphere. The control ROI in the All
HP were then averaged among each grade (WHO I/II/III/IV) to find the best
z-score range for classification. The mean value of different ranges in HPwere
then used to test the significance of group differences between low- and high-grade
glioma.
RESULTS
Figure 1
shows a case with WHO IV glioma. In the blood arrival time map, red-yellow regions
represent early arrivalsand purple regions represent late ones. From the
figure, we can see that the arrival time within ROI is significantly earlier
than the contralateralarea and the distribution of the early arrival is temporally
heterogeneouswithinthe tumor. The average HP of each grade demonstratesa trend of
more early perfusion arrival areas and fewerlate arrival areas along with the grade
increase (shown in Fig.2). The histogram differences in the range of 2-5 (in
z-score) have the most significant patterns for classifying low- and high-grade
glioma (p=0.002). Fig.3 shows the box plotof the sum percentage of the BAH in
this range within the lesion ROI. There were no significant differences
(p>0.05) between LGG and HGG whenaveraging the z-score of the whole lesion
area.
DISCUSSION
High-grade
gliomas have higher blood flow than low-grade ones.Although the perfusion
pattern could be measured by DSC-MR, a contrast agent-free method could provide
a more flexible protocol, especially if the protocol includesa DCE scan before a
late-enhancement measurement. Tumor structure is not uniform and usually
contains several different grade tumor cells. So simply averaging the perfusion
pattern in the lesion area may not reflect the full pattern. The pdf
differences between control and lesion areas could more clearly show the
perfusion pattern changes and provide more useful information to decide the
highest grade of tumor cells in the glioma.
CONCLUSION
The timing
information of blood perfusion in tumor could be detected by computing the
time-delay of resting-state BOLD signal. A histogram analysis of this pattern
could distinguish between low-grade glioma and high-grade glioma.
Acknowledgements
No acknowledgement found.References
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