1H NMR-based Metabolomics study of saliva samples in Patients with Parkinson’s disease
Sadhana Kumari1, Senthil S Kumaran1, Vinay Goyal2, Madhuri Behari2, S N Dwivedi3, Achal Srivastava2, and Naranamangalam R Jagannathan1

1Department of NMR and MRI Facility, All India Institute of Medical Sciences, New Delhi, India, 2Department of Neurology, All India Institute of Medical Sciences, New Delhi, India, 3Department of Biostatistics, All India Institute of Medical Sciences, New Delhi, India

Synopsis

NMR techniques play a major role in understanding the metabolic changes associated with neurological disorders. We used 1H NMR spectra at 700 MHz for identification of biomarkers in PD from saliva samples. The data were processed using MestReNova software (version 10.0) and PLS-DA multivariate analysis using MetaboAnalyst (version 3.0) software. We observed significantly elevated level of butyrate, glycine, phenyl alanine, tyrosine and decreased level of lactate, which may be attributed to poor intestinal absorption in PD patients.

Purpose

To identify NMR sensitive biomarkers from body fluid (Saliva) in Parkinson's disease.

Introduction

Parkinson's disease (PD) is a neurodegenerative disorder, caused by progressive death of dopaminergic neurons in the substantia nigra parscompacta1. Mitochondrial dysfunction and oxidative stress are linked to PD pathogenesis1. Metabolomics investigates metabolite changes in bio-fluids. NMR spectroscopy plays a major role in understanding the metabolic changes (morphological and cognitive correlates) associated with neurological disorders as well as other disorders. In this study we used NMR spectroscopy to identify metabolic biomarkers in saliva sample from patients with Parkinson’s disease in comparison with that of healthy controls.

Patients and methods

We recruited PD Patients (n=8, 5M/3F, mean age: 57 ± 6.78 years) from our neurology movement disorder clinics, conforming to the UKPDS (United Kingdom Parkinson Disease Society) brain bank criteria2. We recruited healthy controls (n=5, 2M/3F, mean age: 49 ± 2.4 years) from among the institute employees. Saliva were collected from patients and healthy controls after 12 hr fasting and centrifuged at 2000g for 10 min at 4oC, samples were separated and stored at -80˚C until NMR spectroscopic experiments. A total volume of 600µl sample was prepared for NMR experiments by adding 400µl saliva, 30µl TSP (0.5mM) and 170µl phosphate buffer, containing 1mM sodium azide. TSP was added to the sample to serve both as a chemical shift reference and concentration standard for the proton NMR studies. Proton NMR spectra of saliva samples were acquired using 700 MHz (M/s Agilent Technologies, USA) at 25˚C using one dimensional (1D) NMR spectroscopy with PRESAT using 90˚ pulse sequence. Parameters for 1D were: no. of scan=128; relaxation delay=14s; spectral width= 10504.2 Hz. Assignment of resonances were carried out using 1D and 2D NMR Spectroscopy. The data was processed using the Vnmrj (version:2.3A, M/s Agilent Technologies, USA) and spectral binning data were estimated using MestReNova software (version10.0, Mestrelab Research, Spain). PLS-DA multivariate analysis was carried out using MetaboAnalyst, a web-based metabolomics data processing tool.

Results

From the obtained spectrum from saliva (representative spectrum in figure 1), 9 metabolites were assigned using 1D and 2D NMR. Comparing the spectrum of PD and healthy controls, we observed the metabolic differences among them by multivariate partial least square discriminate analysis (PLS-DA) and a clear separation was observed between PD and HC (Figures 2).

Discussion and conclusion

Parkinson’s disease (PD) affects the nerves of the entire gastrointestinal (GI) tract and this may cause gastrointestinal malfunctions such as gastroparesis (GP), constipation and small intestinal bacterial overgrowth syndrome3. In the present study, we found significantly increased level of butyrate, glycine, phenyl alanine, tyrosine and decreased level of lactate in saliva sample in PD with respect to HC. Most of the compounds present in blood are also found in saliva, but at reduced concentration. In PD, gastrointestinal malfunction might lead to elevated levels of Butyrate (formed by bacteria residing in the colon by fermentation of carbohydrate)4. Higher glycine may be conferring to the phenotypes associated with PD, as it is an inhibitory neurotransmitter5. Phenylalanine gets converted to tyrosine under biological conditions and a decreased rate of tyrosine utilization in Parkinson's disease may result in elevated level as compared to controls6. This indicates the poor intestinal absorption in PD patients due to villous abnormality. The work provides an insight in determining biomarkers for assessment of PD patients.

Acknowledgements

No acknowledgement found.

References

1. Lei, Shulei, and Robert Powers. NMR Metabolomics Analysis of Parkinson's Disease. Current Metabolomics 2013; 1 : 191-209.

2. Martínez-Martín, P, et al. Unified Parkinson's disease rating scale characteristics and structure. Movement Disorders 1994; 9: 76-83.

3. Jose L, Michael S, et al The treatment of gastroparesis, constipation and small intestinal bacterial overgrowth syndrome in patients with Parkinson’s disease. Expert opinion on pharmacotherapy 2015: 1-16.

4. Keshavarzian, Ali, Stefan Jet al. Colonic bacterial composition in Parkinson's disease. Movement Disorders 2015; 30 : 1351-1360.

5. Ikeda K, Shiojima T, Kinoshita M. Increased plasma concentrations of aspartate, glutamate and glycine in Parkinson's disease. Neuroscience letters1992; 145: 175-177.

6. Braham J, Sarova-Pinhas I, et al. Oral phenylalanine and tyrosine tolerance tests in Parkinsonian patients. British medical journal 1969; 2: 552.

Figures

Figure 1. shows representative 1H NMR spectrum obtained from saliva samples of PD patient (red) and healthy control (green) on same scale.

Figure 2. PLS-DA scores plot of 1H NMR spectra of saliva sample, red for Parkinson’s patients (PD) and green for healthy controls (HC) as 2D and 3D representation respectively.

Table 1. Significant metabolites in saliva sample with their chemical shift, multiplicity and their changes in PD patient group with respect to healthy control group.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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