Sadhana Kumari1, Senthil S Kumaran1, Vinay Goyal2, Madhuri Behari2, S N Dwivedi3, Achal Srivastava2, and Naranamangalam R Jagannathan1
1Department of NMR and MRI Facility, All India Institute of Medical Sciences, New Delhi, India, 2Department of Neurology, All India Institute of Medical Sciences, New Delhi, India, 3Department of Biostatistics, All India Institute of Medical Sciences, New Delhi, India
Synopsis
NMR techniques play a major role in
understanding the metabolic changes associated with neurological
disorders. We used 1H NMR
spectra at 700 MHz for identification of biomarkers in PD from saliva samples.
The data were processed using MestReNova software (version 10.0) and PLS-DA multivariate
analysis using MetaboAnalyst (version 3.0) software. We observed significantly
elevated level of butyrate, glycine, phenyl alanine, tyrosine and decreased level
of lactate, which may be attributed to poor intestinal absorption in PD patients.Purpose
To identify NMR sensitive biomarkers from body
fluid (Saliva) in Parkinson's disease.
Introduction
Parkinson's disease (PD) is a neurodegenerative
disorder, caused by progressive death of dopaminergic neurons in the substantia
nigra parscompacta
1. Mitochondrial dysfunction and oxidative stress
are linked to PD pathogenesis
1. Metabolomics investigates metabolite
changes in bio-fluids. NMR spectroscopy plays a major role in understanding the
metabolic changes (morphological and cognitive correlates) associated with
neurological disorders as well as other disorders. In this study we used NMR
spectroscopy to identify metabolic biomarkers in saliva sample from patients
with Parkinson’s disease in comparison with that of healthy controls.
Patients and methods
We
recruited PD Patients (n=8, 5M/3F, mean age: 57 ± 6.78 years) from our
neurology movement disorder clinics, conforming to the UKPDS (United Kingdom
Parkinson Disease Society) brain bank criteria
2. We recruited healthy controls (n=5, 2M/3F, mean
age: 49 ± 2.4 years) from among the institute employees.
Saliva were collected from
patients and healthy controls after 12 hr fasting and centrifuged at 2000g for 10 min at 4
oC, samples were separated and stored at -80˚C until NMR spectroscopic
experiments. A total volume of 600µl sample was prepared for NMR experiments by
adding 400µl saliva, 30µl TSP (0.5mM) and 170µl phosphate buffer, containing 1mM
sodium azide. TSP was added to the sample to serve both as a chemical shift
reference and concentration standard for the proton NMR studies. Proton NMR spectra of
saliva samples were acquired using 700 MHz (M/s Agilent Technologies, USA) at 25˚C
using one dimensional (1D) NMR spectroscopy with PRESAT using 90˚ pulse
sequence. Parameters for 1D were: no. of scan=128; relaxation delay=14s;
spectral width= 10504.2 Hz. Assignment of resonances were carried out using 1D
and 2D NMR Spectroscopy. The data was processed using the Vnmrj (version:2.3A,
M/s Agilent Technologies, USA) and spectral binning data were estimated using
MestReNova software (version10.0, Mestrelab Research, Spain). PLS-DA
multivariate analysis was carried out using MetaboAnalyst, a web-based
metabolomics data processing tool.
Results
From the obtained spectrum from saliva (representative
spectrum in figure 1), 9 metabolites were assigned using 1D and 2D NMR.
Comparing the spectrum of PD and healthy controls, we observed the metabolic
differences among them by multivariate partial least square discriminate
analysis (PLS-DA) and a clear separation was observed between PD and HC
(Figures 2).
Discussion and conclusion
Parkinson’s disease (PD) affects the nerves of
the entire gastrointestinal (GI) tract and this may cause gastrointestinal
malfunctions such as gastroparesis (GP), constipation and small intestinal
bacterial overgrowth syndrome
3. In the present study, we found significantly
increased level of butyrate, glycine, phenyl alanine, tyrosine and decreased level
of lactate in saliva sample in PD with respect to HC. Most of the compounds
present in blood are also found in saliva, but at reduced concentration. In PD,
gastrointestinal malfunction might lead to elevated levels of Butyrate (formed
by bacteria residing in the colon by fermentation of carbohydrate)
4.
Higher glycine may be conferring to the
phenotypes associated with PD, as it is an inhibitory neurotransmitter
5.
Phenylalanine gets converted to tyrosine under biological conditions and a decreased
rate of tyrosine utilization in Parkinson's disease may result in elevated
level as compared to controls
6. This indicates the poor intestinal absorption
in PD patients due to villous abnormality. The work provides an insight in
determining biomarkers for assessment of PD patients.
Acknowledgements
No acknowledgement found.References
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