Jae-Woong Kim1, Seong-Gi Kim2,3, and Sung-Hong Park1
1Korea Advanced Institute of Science and Technology, Daejeon, Korea, Republic of, 2Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Korea, Republic of, 3Departments of Biomedical Engineering and Biological Sciences, Sungkyunkwan University, Suwon, Korea, Republic of
Synopsis
Phase images of pass-band bSSFP were investigated at
multiple phase cycling (PC) angles at high field. Contrast between white matter
and gray matter in phase images of pass-band bSSFP changed significantly with
PC angle and was twice as high as that of phase images of gradient recalled
echo at a specific PC angle. Phase images of pass-band bSSFP clearly demonstrated
white matter and small structures presumed to be fiber bundles, which may not
be easily visualized in the conventional methods. Phase imaging with pass-band
bSSFP at multiple phase cycling angles may be a good anatomical imaging method
at ultrahigh field.INTRODUCTION
Phase imaging has become
an alternative method to magnitude imaging for anatomical information (1). The
classical approach is using gradient-recalled-echo (GRE) due to the linear
phase profile to resonance frequency shift. In a previous research, phase
imaging with transition-band balanced steady-state free precession (bSSFP) was
explored to show refined anatomy of human brain at 7T (2). Pass-band
bSSFP images have been studied for various purposes (3-5), but phase images of pass-band
bSSFP have not been investigated well. In this study, we investigated phase images of pass-band bSSFP at multiple
phase cycling (PC) angles at ultrahigh field of 9.4T. The result was compared
with phase images from the conventional gradient-recalled-echo (GRE).
METHODS
Sprague-Dawley
rats were studied with approval from the Institutional Animal Care and Use
Committee (N=7). Pass-band bSSFP and GRE scans were conducted using 9.4T Varian
animal scanner (Palo Alto, CA). The common scan parameters were matrix
size=192×256 (phase-encoding×readout), TR/TE=20/10ms, single slice with
thickness=2mm, field of view=2.4×2.4cm². Only for bSSFP, additional scans of
TR/TE=10/5 ms were performed. The flip angles were set at 16˚ in bSSFP and 8˚ in GRE
acquisition. In bSSFP study, 4 different phase cycling angles of 0˚, 90˚, 180˚,
and 270˚ (denoted as PC0, PC1, PC2, and PC3, respectively) were applied to get
separate data for both TR/TE=20ms/10ms and 10ms/5ms. Acquisition of the same
slice was repeated 24 times (TR/TE=20 ms/10ms) or 48 times (TR/TE=10/5ms),
maintaining the same scan time of 92s for each of the 9 sequences (1 GRE and 8 bSSFP
at 2 TR values and four PC angles). The 9 scans composed one full dataset and acquisition
of datasets was repeated 15 to 25 times varying depending on subjects.
Eventually all the data from within each scan and across different datasets
were averaged for each of the 9 sequences.
To obtain the
image in isotropic inplane resolution of 93.75μm, the raw dataset was
sequentially zero-padded and Fourier-transformed. The large-scale phase
variation was mitigated by applying a high-pass filter (generated by a 2D
Gaussian filter with FWHM of 60
voxels) to the original data.
The
phase images from the 9 sequences were compared in terms of phase contrast
between white matter (WM) and gray matter (GM) by calculating the average of
phase values within each region of interest (ROI). The ROIs of WM and GM were
manually set in corpus callosum and in cortical cortex respectively (Fig. 1).
RESULTS
Figure 2 shows the quantitative ROI analysis
of phase values from the bSSFP and GRE scans. In bSSFP, the phase values of WM varied
with respect to PC angle, while the phase values of GM changed little with PC
angle. The WM to GM phase ratio was the highest in PC3 and was twice as high as
that in GRE, indicating phase images of pass-band bSSFP with a specific PC
angle can present WM better than the phase image of conventional GRE method.
Figure 3 shows the phase images of bSSFP
acquisition in 8 different conditions and 1 GRE acquisition. The qualitative
comparison between bSSFP phase images also demonstrated that the phase contrast
varied significantly with PC angles (Fig. 3a). Interestingly, bSSFP PC3 in
20ms of TR phase image offered a noticeable visibility of the WM tissues and small
structures presumed to be fiber bundles, such as corpus callosum, anterior
commissure, and the neural tracts of striatum (Fig. 3a). Vascular
structures were mostly visible as dark signals (i.e., negative phase values),
whereas WM regions and the small structures presumed to be neuronal fiber
bundles were mostly presented as bright signals (i.e., positive phase values).
DISCUSSION
In
ultrahigh field, the high susceptibility effects induce remarkable phase contrast
between tissues and small microstructures. This makes bSSFP promising to be
conducted in high field. In addition, bSSFP showed the capability of phase
imaging for advanced anatomy through the multiple phase cycling approach, which
enables the inspection of complex brain microstructures.
Anterior commissure has been easily observed by the
conventional MRI imaging techniques, since the WM tissues exist in bundles of
nerve fiber. However, substructures of striatum have been difficult to be
detected in routine MRI protocol. From this reason, previous MRI studies were
limited to investigating the severity of striatal damage by staining (6) or
utilizing magnetic resonance spectroscopy (7).
CONCLUSION
The
phase images of pass-band bSSFP can provide advanced anatomical information by
using multiple phase cycling at ultrahigh field. The phase image of bSSFP can
visualize the substructure of striatum, which cannot be imaged by conventional
methods. bSSFP will provide a new insight into phase imaging for anatomical
information.
Acknowledgements
No acknowledgement found.References
1.
Duyn, J.H. et al. High-field MRI of brain cortical substructure based on signal
phase. PNAS USA, 2007; 10;104(28):11796-11801
2. Lee, J. et al. Improving
contrast to noise ratio of resonance frequency contrast images (phase images)
using balanced steady-state free precession. NeuroImage 2011;54,2779–2788
3. Park, S-H. et al. Sensitivity and
specificity of high-resolution balanced steady-state free precession fMRI at
high field of 9.4 T. NeuroImage 2011;58,168–176
4. Yan, L. et al. Quantification of arterial
cerebral blood volume using multiphase-balanced SSFP-Based ASL. MRM 2012;68,130–139
5. Nayak, K.S. et al. Spiral balanced steady-state free precession
cardiac imaging. MRM 2005;53,1468–1473
6. Hansson, O. et al. Transgenic mice
expressing a Huntington’s disease mutation are resistant to quinolinic
acid-induced striatal excitotoxicity. PNAS USA 1999;96,8727–8732
7. Sánchez–Pernaute, R. et al. Clinical
correlation of striatal 1H MRS changes in Huntington’s disease. Neurology 1999;53(4)806-812