Improvement of Quantification of 1H Cardiac MR Spectra Acquired at 3T by the Use of Prior Knowledge
Ariane Fillmer1,2, Andreas Hock2,3, and Anke Henning2,4

1Physikalisch Technische Bundesanstalt (PTB), Berlin, Germany, 2Institute for Biomedical Engineering, University and ETH Zurich, Zurich, Switzerland, 3Department of Psychiatry, Psychotherapy and Psychosomatics, Hospital of Psychiatry, University of Zurich, Zurich, Switzerland, 4Max Planck Institute for Biological Cybernetics, Tuebingen, Germany

Synopsis

1H cardiac MRS is a promising tool for investigation of human heart disease. In this context the independent quantification of intramyocellular (IMCL) and extramyocellular lipids (EMCL) is desired. Quantification itself, however, remains challenging. This work investigates, whether quantification of metabolite signals within 1H cardiac MR spectra could be improved by the use of prior knowledge about the behavior of metabolite signals in the quantification process.

Introduction

A promising tool to investigate human heart disease is cardiac 1H MR spectroscopy (MRS)1. Particularly the intramyocellular lipid (IMCL) concentration might be of interest as a biomarker for heart disease, as it represents an important energy depot of muscle cells2. Therefore the independent quantification of IMCL and extramyocellular lipids (EMCL) is desirable. However, quantification of 1H spectra remains challenging, as different metabolite signals may overlap and signal to noise ratios of in vivo MRS are rather small. This problem is aggravated in cardiac spectroscopy, due to quality limitations of spectra imposed by cardiac and respiratory motion, fluctuating and inhomogeneous B0 fields, as well as finite scan times.

This work investigates, whether quantification of metabolite signals within cardiac MRS improves by the use of prior knowledge about the dependence of chemical shifts on the muscle fiber orientation in the quantification process.

Theory

Although IMCL and EMCL have the same chemical composition, the signals of the different compartments experience a different chemical shift, due to bulk susceptibility effects3, as was demonstrated in skeletal muscle studies. While the signal frequency of the IMCL signal remains constant, the chemical shift of EMCL exhibits an angular dependency on the muscle fiber orientation with respect to the main magnetic field (B0)2. Assuming reproducible voxel positioning with respect to cardiac fiber orientation, the EMCL frequency shift ($$$Δω_{EMCL}$$$) can be expected to be equivalent for four different angles, between the voxel and B0 (fig. 1). Hence, $$$Δω_{EMCL}(α)$$$ might be described by equation (1) (see fig. 2). Furthermore, taurine and creatine are subject to dipolar coupling due to restricted tumbling motion2,4. The signal of the three chemically equivalent spins of the creatine methyl group (CH3) splits into a triplet-structure with chemical shift and amplitude of the satellite peaks depending on the average angle between the interaction direction and B0 ($$$Θ$$$). This coupling effect is proportional to $$$3\cdot\cos^{2}(Θ)-1$$$. Hence, the amplitudes of the satellite peaks ($$$A_{Cr28}(α)$$$) of the CH3 group at 3.03ppm can be described by equation (2) (fig. 2).

Subjects and Methods

1H cardiac spectra were acquired from the interventricular septum (fig. 3a,b) of 10 healthy female volunteers (bmi: ∅21.1kg/m2) using the combination of image-based B0-shimming5,6, ECG-triggering and navigator-gating along with retrospective frequency-alignment and phase-correction of metabolite-cycled7, non-water-suppressed MRS8,9,10. All measurements were performed at a 3T Achieva system with a 32 channel cardiac coil (Philips Healthcare, Best, NL). Spectra were postprocessed with MRecon (Gyrotools, Zurich, CH) as detailed in [10], before they were fitted with LCModel11 (fig.3c). The frequency shift of the EMCL signal at 1.5ppm (EMCL15) with respect to the IMCL signal at 1.3ppm (IMCL13) was extracted from the LCModel fit results and their dependency on $$$α$$$ was investigated. The metabolite concentrations calculated by LCModel, are referenced against creatine. However, the concentrations of the satellite peaks of the CH3-triplet are not considered. This leads to an overestimation of metabolite/Cr ratios, which depends on the angle. Hence, the Cr28/Cr ratio, which is the concentration ratio of the CH3 satellite peaks at 2.8ppm to the main creatine peak, was taken from the LCModel fits and analyzed with respect to $$$α$$$. Metabolite concentrations were corrected by taking the Cr28/Cr ratio from LCModel into account. Additionally metabolite concentrations were corrected by $$$2\cdot A_{Cr28}(α)$$$, as the CH3 resonance splits into a triplet and the satellite peak amplitudes depend on $$$α$$$.

Results

In fig. 4 $$$Δω_{EMCL}$$$ is plotted versus $$$α$$$, together with a fit of equation (1). Two data points were excluded due to insufficient data quality. It can be seen that $$$Δω_{EMCL}$$$ follows the angular dependency in equation (1) closely. The results are in good accordance with the results from previous studies in skeletal muscle2. Fig. 5a plots Cr28/Cr ratio over $$$α$$$ and from the fit of equation (2) can be seen that the data points follow the suggested mathematical relation. In case of correlating (Pearson) unsaturated IMCL (I21) with the volunteers BMI (fig.5b) the creatine correction schemes lead to a higher regression coefficient R2. While such a linear correlation of unsaturated IMCL and BMI seems plausible, further studies are required to establish if this correlation is indeed to be expected in healthy subjects and whether correlation changes could arise in disease.

Conclusion

Prior knowledge on the angular dependence of the chemical shift of EMCL signals and the signal splitting of dipolar coupled spins allow for prediction of EMCL frequencies and the amplitude of the satellite peaks of the CH3 signal. This information improves accuracy and precision of the quantification if used in correction schemes. The feasibility of separate quantification of EMCL versus IMCL in the myocardium is confirmed.

Acknowledgements

No acknowledgement found.

References

1. P. A. Bottomley et al, The Lancet 351(9104):714-718 (1998)

2. C. Boesch et al, NMR Biomed 19:968-988 (2006)

3. F. Schick et al, MRM 29:158-167 (1993)

4. R. Kreis et al., MRM 37:159-163 (1997)

5. M. Schär et al, MRM 51:799-806 (2004)

6. A. Fillmer et al, MRM 73:1370-1380 (2015)

7. W. Dreher et al, MRM 54:190-195 (2005)

8. A. Hock et al, MRM 69:1253-1260 (2013)

9. E. L. MacMillan et al, Proc Intl Soc Mag Reson Med 19:406 (2011)

10. A. Hock et al., Proc ESMRMB 30:390 (2015)

11. S. W. Provencher MRM 30:672-679 (1993)

Figures

Figure 1: The chemical shift of EMCL and dipolar coupling effects depend on the angle between the muscle fiber orientation with respect to the magnetic field (B0). Assuming reproducible voxel placement with respect to the muscle fiber orientation, the dependence can be examined with respect to the angle between the voxel itself and B0 ($$$α$$$). Since only the angle with respect to B0 is of interest, the four voxel angles $$$α$$$, $$$-α$$$, $$$α - π$$$ and $$$π - α$$$ are equivalent.

Figure 2: Equations (1) and (2) along with variable explanations.

Figure 3: (a) Short-axis and (b) quasi-four-chamber view of the positioning of the spectroscopy voxel and saturation bands within the interventricular septum of the human heart. (c) Measured 1H MR spectrum along with the fit and the fitted basis functions from LCModel.

Figure 4: Chemical shift difference $$$Δω_{EMCL15}$$$ plotted over $$$α$$$, the angle between voxel and B0. A fit of equation (1) is indicated by the red curve. The inlay displays the same values and fit over a range from $$$-π$$$ to $$$π$$$.

Figure 5: (a) Concentration ratios of the creatine satellite peak from LCModel are plotted against α (blue dots). As $$$α$$$ and $$$-α$$$ are equivalent, data points are mirrored (blue circles) for visualization. A fit of equation (2) is indicated. I21/Cr ratios were corrected by the fitted Cr28 from LCModel (b) and by simulated satellite peaks (c) from the fit in (a). Significant (p<0.01) correlations between I21/Cr and the BMI is indicated by the solid (LCModel) and dashed (corrected) lines.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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