Peng Lai1, Joseph Yitan Cheng2, Shreyas S Vasanawala2, and Anja C.S Brau3
1Global MR Applications and Workflow, GE Healthcare, Menlo Park, CA, United States, 2Radiology, Stanford University, Stanford, CA, United States, 3Global MR Applications and Workflow, GE Healthcare, Munich, Germany
Synopsis
Respiratory gating (RG) is commonly used for free-breathing 3D MRI. Conventional RG based on acceptance/rejection performs hard-threshholding on acquired data and suffers from either increased motion corruption with a large acceptance window or long scan time/increased undersampling artifacts with a small window. This work developed a non-iterative respiratory soft-threshholding method by incorporating the motion-induced error into autocalibrating parallel imaging (ac-PI). The proposed method showed more effective motion suppression on free-breathing 3D cine than conventional respiratory gating on the same datasets. This method can be generalized to suppress other types of motion with full acquisition or ac-PI as well.Purpose
Many 3D MRI acquisitions necessitate
free-breathing imaging for high resolution and large volumetric coverage and
thus require efficient respiratory gating (RG) to suppress adverse motion
effects. Conventional RG is performed by selection of an acceptance window (AW)
for acceptance/rejection of data acquisition. Such a hard-threshholding scheme
fully accepts data within the AW ignoring intra-window motion corruption and
completely rejects out-of-AW data discarding their potential for improving
reconstruction. Theoretically, respiratory soft gating (RSG) [1] that utilizes data
with respiratory-position-based soft-thresholding can more efficiently suppress
motion. However, RSG enforces soft-threshholding as a data consistency
constraint and thus is limited to iterative processing with intensive computation. This work aimed to
develop a non-iterative solution based on motion-error regularization for
conventional auto-calibrating parallel imaging (ac-PI).
Theory
ac-PI synthesizes missing k-space data from neighboring
source k-space data (
Sj, j=1,2,…).
The reconstruction weights,
x, for a
synthesis pattern are calculated by solving
Ax=b
(1) [2], with
A and
b for the source and target calibration
data matrixes, respectively.
x is
calculated by minimizing the
L2-norm
error of
||Ax-b||2 (2). The
j-th column in
A,
A.,j, is
comprised of concatenated calibration data with a k-space shifting corresponding
to
Sj in reconstruction. In
free breathing imaging,
Sj
is collected with motion displacement and, accordingly,
A.,j needs to be updated with
A.,j+e.,j to
calculate the optimal
x in the
existence of motion, where
ej
represents the change in calibration data with the corresponding motion of
Sj.
Alternatively, according to equation 1, motion at
Sj would increase the
L2-norm error by
δj=xj||e.,j||2 and the entire reconstruction error due to
motion can then be approximated by
Σ(δj). Therefore, the original ac-PI equation in (2)
turns to
min(||Ax-b||2+||Δx||2)
(3), where
Δ
is a diagonal matrix with
Δj,j=sqrt(δj).
This is the well-known Tikhonov regularization with an analytical solution:
x=(ATA+ΔTΔ)-1ATb
(4). Equation 4 in effect reduces
xj
for “bad” data with
large
δj to suppress
motion (
min||Δx||2) and accordingly increases
xj for “good”
data with small
δj
to improve data fitting (
min||Ax-b||2).
Methods
The proposed Motion-Error Regularized Ac-PI
(MERA) method is validated in free-breathing 3D cardiac CINE with k-t sampling
and a pseudo-random vieworder. Acquisition
of center 8% k-space was repeated by a factor of 4 for estimating Δ as follows (Fig.1). From the simultaneously recorded respiratory bellow signal,
we generate a respiratory histogram and derive the most consistent position near
end-expiration (PEE) and end-inspiration
(PEI). In the repeatedly
acquired center k-space, we generate two datasets at PEE (KEE)
and PEI (KEI), respectively. The motion-induced error from PEE to PEI, ||KEE-KEI||2, is calculated.
Then, δP at a respiratory position, P, is estimated by δP= ||KEE-KEI||2(P-PEE)/(PEI-PEE), assuming δP
increases linearly with off-PEE
displacement. Note that different coil channels sense motion differently and create
different δ’s (e.g. lower for
elements near dorsal and higher for elements near chest wall). Therefore, ||KEE-KEI||2 is calculated individually for each coil channel
to generate coil-specific δP‘s.
3D
CINE was scanned on 4 healthy volunteers during free-breathing with 5× acceleration on a GE 3T (MR750).
Data were processed using a k-t ac-PI method, kat ARC [3]. Static-tissue-removal
(SSR) [4] was used to first identify and remove signals from static tissues (e.g.
chest wall, dorsal) in the original data to improve kat ARC at high
acceleration. The static tissue image was generated from a time-projection dataset
with weighted averaging based on δP to obtain motion-suppressed reconstruction
in static tissues. Next, in kat ARC, all k-space lines, including the acquired to
correct motion corruption from acquisition, are synthesized based on equation 4
and Δ is constructed based on the P of each source line for each synthesis
and the prior-calculated δP.
Because each k-space neighborhood contains a mix of ‘good’ and ‘bad’ data,
equation 4 synthesizes each line in the entire k-space with an optimal balance (min overall L2-norm error) between data fitting and motion suppression.
Results
As shown in Fig.2, MERA effectively suppresses motion
ghosting and edge blurring that is apparent without gating. In comparison,
conventional RG with an AW of 50% on the same dataset shows visible aliasing
and motion artifacts. RG suffers from either increasing aliasing with smaller
AW or increasing motion with larger AW. In the case of Fig.3, MERA suppresses
motion in free-breathing acquisition and provides heart delineation similar to
breathholding.
Discussion
This work incorporates a simplified model-error
model into ac-PI and derived a new non-iterative respiratory soft gating
technique. The proposed method can more effectively suppress motion than
conventional RG. Our experiments show that MERA can also apply to full
acquisition and non-k-t ac-PI and be used to suppress cardiac motion.
Acknowledgements
No acknowledgement found.References
[1] Cheng YJ, JMRI 2014; [2] Griswood M, MRM 2005; [3] Lai P, ISMRM 2009; [4]
Lai P, ISMRM 2013