Synopsis
Direct
dynamic 17O-MRI allows quantification of the cerebral metabolic rate
of oxygen consumption (CMRO2). The influence of acquisition
parameters on the precision of CMRO2 quantification needs to be
investigated for routine application, but the costly and rare 17O
gas prohibits extensive imaging studies. Thus, in this work a flexible,
Fourier domain-based simulation framework is presented and analytical tumor and
numerical 17O MRI brain phantoms are utilized based on experimental 17O
relaxation times and signal-to-noise ratios. Precision of CMRO2
quantification is evaluated and optimal acquisition parameters are given.Introduction
$$$\hspace{1cm}$$$In healthy brain tissue, oxidative metabolization of
glucose fulfills most of cellular energy demand, whereas in tumor tissue the energy
production is usually shifted towards less efficient anaerobic glycolysis[1]. To
quantify energy metabolism, an imaging method would be desirable to map the
local cerebral metabolic rate of oxygen consumption (CMRO2).
$$$\hspace{1cm}$$$CMRO2 can be quantified with 15O-PET[2,3] or with direct 17O-MRI[4-8], where the 17O signal
change is detected after the administration of 17O-enriched gas. Recently, 17O-MRI results in humans at 3T were presented[7,8];
however, acquisition parameters need to be optimized for clinical routine
application, but the costly and rare 17O2 gas allows only for limited
imaging studies. Thus, in this work a flexible simulation framework and two
phantoms: analytical tumor and numerical, are presented to analyze the
influence of various protocol parameters on CMRO2 quantification by
simulation.
Material and Methods
$$$\hspace{1cm}$$$17O-MR signal in k-space was
either analytically expressed or numerically estimated to simulate a dynamic 17O-MRI
experiment, which consists of 4 phases:
baseline, inhalation of 17O-enriched gas, re-breathing and wash-out[6-8]. Signal intensity in different
brain regions was simulated separately: the modulation of the 17O
signal was calculated on the k-space sampling time scale (i.e., the TR).
Expected signal changes over time for the different tissues ρi(t) were retrieved and calculated according to CMRO2
15O-PET studies[2,3]. After
reconstruction of the dynamic datasets, input CMRO2 values were compared to the simulation
results from fitting.
$$$\hspace{1cm}$$$At first, simulations were performed on an AnalytiCally
Represented Oxygen-17 BrAin Tumor (ACROBAT) with the following substructures
(Fig.1e): white (WM) and gray brain matter (GM), cerebral spinal fluid (CSF),
and the tumor regions contrast-enhancing rim (CE), necrotic tumor center (NE)
and perifocal edema (PE).
$$$\hspace{1cm}$$$Making use of linearity of the FT, the Fourier domain
signal Sk of a ACROBAT phantom was
calculated as a combination of multiple 3D objects, that have an analytic representation
in k-space (ellipsoids[9] and spheres):
$$Sk(\rho(t),G,\textbf{k})=\sum_{i}^{N}Sk_i(\rho_i(t),G_i,\textbf{k})\cdot{}e^{\frac{-(TE+\widetilde{t})}{T_2^*}}+A_N\cdot(randn+j\cdot{}randn).$$
Gi: shape of ith object, $$$\widetilde{t}$$$ indicates the sampling time for a certain
position in k-space. The last term represents Gaussian noise, which was added
to the complex k-space signal Sk using experimental SNR values (amplitude $$$A_N\sim{1/}\sqrt{BW}$$$,BW-readout bandwidth).
Measured at 3T MR system in human brain T2*=2ms decay was assumed[4]. K-space simulation
was done for a radial image acquisition with density adapted sampling using
parameters of a 17O-MRI experiment at 3T[7,8].
$$$\hspace{1cm}$$$Secondly, a numerical 17O-MRI phantom was
created from the segmented 1H MPRAGE data, where 17O
concentrations were assigned to each brain tissue: GM, WM and CSF (Fig.1d). An
operator A, representing dynamic 17O-MR measurement (sampling k-space trajectory), was than applied to calculate
k-space signals. Finally, the framework for signal dynamics described above was
applied.
Results and Discussion
$$$\hspace{1cm}$$$Figure
2 shows CMRO2 differences in GM, WM and CE as a function of spatial
resolution and BW. For WM small deviations of 2% are seen at Δx≥8mm and at all BWs, since the simulated WM region
is large (Fig.1e). For Δx<8mm CMRO2 is underestimated due to
nonlinear signal behavior at low SNR. If only 8 or less out of 10 simulation runs for the parameter pair were successful, then they are not plotted,otherwise blue/black error bar is shown for 9/10 successful runs. As seen in Fig.2, BW≤250Hz/px and Δx≥8mm are required for reproducible CMRO2
quantification in CE tumor region. Results for different temporal and
spatial resolution (Fig.3) are more heterogeneous: CMRO2 values
change smoothly for a temporal resolution 75≤Δt≤240sec,
whereas they vary strongly otherwise. Thus, intermediate parameter settings
seem unfavorable. For CMRO2
quantification in the CE region 150≤BW≤250Hz/px,
and Δx>7mm are required.
$$$\hspace{1cm}$$$Results of the numerical
phantom (Fig.4) show that GM CMRO2 (1.12±0.11µmol/gtissue/min) is always
underestimated by about 30%, but does neither depend on BW nor on spatial resolution,
whereas for WM CMRO2 values are overestimated. The best values are
found at BW=150Hz/px and 7≤Δx≤9mm, and for BW=250Hz/px and Δx≥7mm,
with the mean CMRO2=0.74±0.03
µmol/gtissue/min and 20% overestimation.
$$$\hspace{1cm}$$$Calculated
underestimation of the CMRO2 values is different in two presented
phantoms since the ACROBAT phantom has simpler structure than the
numerical phantom. However, the regions of most precise CMRO2 values
are similar: 150≤BW≤250Hz/px and 8≤Δx≤9mm for brain and tumor regions.
Conclusions
$$$\hspace{1cm}$$$A framework with an analytical tumor ACROBAT and
numerical phantoms are presented for the simulation of the dynamic
17O-MRI
experiments which can be used for flexible and fast evaluation of optimal
acquisition schemes. Based on the proposed framework, other phantoms are
currently implemented to investigate the effect of different object sizes on
the precision of CMRO
2 quantification. The influence of the MR system,T
1 relaxation time
and other data acquisition scheme can also be included in the framework.
Acknowledgements
Support from NUKEM Isotopes Imaging GmbH is gratefully
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