Ashish Gupta1, Keerti Ameta2, Deepak Ameta3, Rishi Sethi3, Deepak Kumar1, and Abbas A Mahdi2
1metabolomics, Centre of Biomedical Research, Lucknow, India, 2Biochemistry, King George's Medical University, lucknow, India, 3Cardiology, King George's Medical University, lucknow, India
Synopsis
This
study addresses myocardial ischemia in patients presenting with unstable angina
using 1H NMR metabolomics of filtered serum. The study includes serum
samples from 65 unstable angina patients (UA) and 62 healthy controls (HC). Principal
component analysis and orthogonal partial least square discriminant analysis were
applied to generate a prediction model. Results revealed that five biomarkers—valine,
alanine, glutamine, inosine and adenine—could differentiate 95% of UA from HC
with utmost sensitivity and specificity. 1H NMR-based filtered serum
metabolic profiling appears to be an assuring, least invasive and faster way to
screen and identify myocardial ischemia in UA patients.INTRODUCTION:
While
continuous efforts are being made for efficient diagnosis of coronary artery
disease (CAD), research for appraisal of myocardial ischemia in unstable angina
(UA) is still needed because UA lacks tissue damage in contrast to myocardial
infarction. Therefore, we applied NMR-derived metabolomic of serum samples obtained
from patients presenting with UA and healthy volunteers (HC) with no history of
angina. Our aims were two-fold: First, is NMR derived metabolomics sufficiently
robust to identify perturbations in circulating metabolites and detect an
ischemic episode in UA patients. Second, we wanted to employ this least-invasive
metabolomic strategy to discriminate UA patients from HC in order to predict
acuteness of the disease by preparing a statistical model of prediction using
multivariate statistics.
MATERIALS AND
METHODS: A
total of 65 patients presenting with symptoms of acute UA (Braunwald
Classification-II and III), and prolonged chest pain (even at rest), (a
negative value of hs-cardiac Troponin-T, [<0.014ng/ml]) were enrolled in the
study. Blood samples were collected within 4 hours of onset of angina. These
patients were confirmed of having CAD by coronary angiography. The study
comprised 62 age-comparable healthy controls (HC) with no prior history of
angina/CAD. Serum was separated from blood (2ml) of each subjects using
standard protocol. Each serum samples were passed through 3kDa cutoff
centrifugal filters to remove abundant amount of several types of proteins and
lipoproteins, and NMR experiments were performed on collected filtrates. A
Bruker Avance III 800 MHz spectrometer was used to perform NMR experiments
using 400μL of each filtered serum sample in a 5-mm NMR tube. Trimethylsilyl
propionic acid sodium salt (TSP, 0.84 mmol/l) deuterated at CH2 groups was used
for the deuterium lock, reference, and standard peak for the quantitation of
metabolites. For all the specimens, one dimensional 1H NMR
experiments were performed at 22oC by suppression of water resonance
by pre-saturation. The parameters used were as follows: spectral width, 16666
Hz; time domain points, 65k; relaxation delay, 10s; pulse angle, 90o;
number of scans, 128; and line broadening, 0.3 Hz. Multivariate chemometric
analysis was applied on the NMR data with the help of ‘Unscrambler X’ software.
The data were subjected for principal
component analysis (PCA) followed by orthogonal partial least square
discriminant analysis (OPLS-DA). To avoid over-fitting of the OPLS-DA model, an
internal cross-validation (ICV) was also applied using 60% of the data as
training set and 40% of the data as test set. A prediction model was
constructed to detect potential biomarkers related to the discrimination between
UA and HC cohorts. To evaluate the clinical utility of biomarkers derived from
PLS-DA model, ROC analysis was also performed.
RESULTS: Figure 1 shows 1D 1H NMR spectra of
filtered serum of HC and UA with an overview of complete metabolic profile and
chemical shift assignments. PCA and OPLS-DA reveals that total eleven
variables—creatinine, valine, alanine, glutamine, malonate, cis-aconitate,
lactate, uracil, inosine, hippurate, and adenine—were playing major role to
differentiate UA from HC. Subsequent spectral analysis reveals that valine,
cis-aconitate, uracil, inosine, hippurate, and adenine were down regulated and
creatinine, alanine, glutamine, malonate, and lactate were up regulated in UA
with compared to HC. ROC analysis with leave-one-out approach reveals that
mainly five variables—valine, alanine, glutamine, inosine and adenine—were
playing major role to achieve utmost AUC of ROC (0.99) for the 95% differentiate
of UA from HC with 96% sensitivity and 95% specificity.
DISCUSSION: The main finding
of this study is that the NMR-derived metabolomics technique is sufficiently
robust and accurate to identify perturbations in the circulating small
metabolites during an ischemic event in UA patients. Valine has
been demonstrated to reverse the electrophysiologic changes
1 caused
by metabolic inhibition and offers cardioprotection during acute ischemia
2-3. In
order to maintain the ATP levels during ischemic episode, probably an augmented
glutamine and alanine release leads to metabolic remodeling, as observed in present
and previous observations
4-6. Inosine exhibited inhibitory action
against adenosine diphosphate (ADP)-induced platelet activation
7.
However, platelet activation plays an important role in pathology of UA and the
decreased level of both adenine and inosine correlates with platelet
aggregation
8. The correlation between platelet aggregation and CAD
has well been documented in various studies
9-10. Apart from the
above narrated description of most significant metabolites, six
metabolites—lactate, malonate, creatinine, cis-aconitate, hippurate, and
uracil— were also found to be considerably perturbed in UA compared to HC
metabolic profile. In essence, our findings provide evidence in support of
metabolomic strategies that can be efficiently used to describe and relate the
metabolic remodeling during ischemia in acute UA milieu.
Acknowledgements
No acknowledgement found.References
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