Free-Breathing Dynamic MRI with Sliding Slice Distorted Simultaneous Multi-Slice
Kevin M Johnson1, James H Holmes2, and Scott B Reeder1,3,4

1Medical Physics, University of Wisconsin - Madison, Madison, WI, United States, 2Global MR Applications and Workflow, GE Healthcare, Madison, WI, United States, 3Radiology, University of Wisconsin - Madison, Madison, WI, United States, 4Biomedical Engineering, University of Wisconsin - Madison, Madison, WI, United States

Synopsis

Sliding slice MRI is a technique which uses a magnetization prepared sliding 2D slice to cast respiratory motion artifacts as geometric distortions rather than diagnostically obscuring ghosting routinely associated with 3D phase-encoding. In this work, we present the combination of simultaneous-multi-slice with pseudo-random Cartesian based sliding slice sampling. This combination allows increased frame rates, FOV tailoring, and reduces sensitivity to off-resonance compared to past non-Cartesian radial and spiral based approaches. Preliminary results are shown in moving phantoms and in-vivo free breathing DCE, demonstrating very good image quality.

Purpose

Respiratory motion remains a major challenge to the use of MRI in the body. This is most notable in dynamic contrast enhanced (DCE) imaging of the chest and abdomen, which requires continuous imaging to capture bolus dynamics. While numerous motion-insensitive, free-breathing, accelerated 3D imaging strategies have been proposed1-2, they remain sensitive to complex respiratory patterns. The alternative use of rapid 2D multi-slice imaging would be appealing due to its ability to freeze motion; however, 2D multi-slice imaging is highly sensitive to in-flow and steady state preparation. Recently, sliding 2D slices were proposed as a means to alleviate these artifacts and capture images in which motion artifacts manifest as correctable geometric distortions3. A drawback to this technique is the need for highly accelerated 2D spiral imaging which is sensitive to off-resonance artifacts. In this work, we investigate the synergistic combination of simultaneous multi-slice, sliding slices, pseudo random Cartesian sampling with post-processing registration to allow for high frame rates, lower demands on in plane acceleration, and FOV tailoring.

Methods

A pulse sequence diagram is shown in Figure 1. As in the initial spiral based implementation, imaging was performed by interleaving a 3D saturation pulse with a 2D imaging module. Data is sampled as shown in Fig 2 with data collected during a continuous sweep of the excitation frequency of a multi-band RF pulse. During this sweep, readouts are collected with ky phase encodings utilizing pseudorandom sampling, based on the golden ratio4. As viewed as a function of time in Figure 2b, this creates a set of images with overlapping replicates of the underlying image. The signal of each sample is modeled as a function of the k-space position (kx,ky) and the location of the slices (z1,z2):

$$d(k_x,k_y,z_1,z_2)=\int_{}^{}\int_{}^{}\int_{}^{} S(x,y,z)e^{i2\pi(xk_x+yk_y)}\left[G(z-z_1)I_{t+1}+G(z-z_2)I_{t}\right]$$

where G is the slice excitation profile; S is the sensitivity map; and It is the image of time frame t. Making a discrete approximation of Eq1, images can be recovered utilizing a penalized least squares, with the penalty being a smoothness constraint to prevent super resolution effects (i.e. the resolution in z should not exceed the slice thickness). Note due to the interleaved nature of the data in time and space, the reconstruction of any given slice requires the reconstruction of all slices at all time points. To evaluate feasibility, phantom and healthy volunteers (after IRB approval and informed consent) were imaged on a clinical 3.0T system (MR750, GE Healthcare, WI, USA). Images were first collected from the ADNI phantom placed in an 8-channel head coil. Sagittal images were acquired with 20mm, ~8Hz sinusoidal S/I motion of the table with 2D, 3D, and simultaneous sliding slice. Sliding slice parameters included: resolution=1.5x1.9x4mm3,TE/TE=1.3/3.8ms, flipimaging=15°, flipsat=8°, with 2 (ky) x 2 (slice) parallel imaging acceleration, 8s temporal footprint, and 20 time frames. 2D and 3D sequences were matched to the same temporal footprint and spatial resolution. Apparent CNR was calculated using the ratio of the highest CNR sphere to that of the background. Dynamic in-vivo free breathing, DCE imaging of the entire thoracic cavity was subsequently performed during bolus passage of a 0.1mmol/kg dose of gadobenate dimeglumine with a 32-channel torso array coil (Neocoil, Pewaukee, WI, USA). Imaging parameters were identical to those used for phantom experiments.

Results

Figure 3a shows images acquired without slice unwrapping, with the temporal dimension along the horizontal axis. Periodic motion is clearly visible with two replicates, representing the two slices. Replicates were successfully unwrapped, creating images at twice the frame rate. Figure 3b shows 2D, 3D and sliding images. Motion causes significant artifact and ghosting in the 3D images. 2D imaging effectively freezes motion; however, images suffer from lack of contrast and stair stepping artifacts. The sliding approach maintains high contrast and motion insensitivity, which is reflected in high apparent CNR (23.2) compared to 2D (1.15) and 3D (8.34). Figure 4, shows the source sagittal images of in-vivo feasibility testing. Images demonstrate complete freezing of motion, including Cardiac contraction. Reformatting the images into the coronal plane, as in Figure 5b, shows the manifestation of motion in this case with the motion state being different in the R/L dimension. This type of motion is potentially correctable via non-rigid registration, preliminarily shown in Figure 5b.

Discussion and Conclusion

The combination of simultaneous multi-slice imaging with sliding slices allows additional acceleration that translates to higher temporal frame rates. The incorporation with Cartesian sampling facilitates FOV tailoring and increases robustness to off-resonance artifacts. This allows for sagittal acquisitions, casting most respiratory motion in-plane, which is amenable to correction via registration.

Acknowledgements

We gratefully acknowledge GE Healthcare and NIH-NS066982 for assistance and support.

References

1. Feng, L., Axel, L., Chandarana, H., Block, K. T., Sodickson, D. K. and Otazo, R. (2015), XD-GRASP: Golden-angle radial MRI with reconstruction of extra motion-state dimensions using compressed sensing. Magn Reson Med. doi: 10.1002/mrm.25665

2. Cheng, J. Y., Zhang, T., Ruangwattanapaisarn, N., Alley, M. T., Uecker, M., Pauly, J. M., Lustig, M. and Vasanawala, S. S. (2015), Free-breathing pediatric MRI with nonrigid motion correction and acceleration. J. Magn. Reson. Imaging, 42: 407–420. doi: 10.1002/jmri.24785

3. Johnson KM, Holmes J, and Reeder S. Imaging in the presence of Motion with Sliding Slice Distortions. (2015). Proceedings of the 23rd annual meeting of ISMRM. Toronto, ON, Canada. #810

4. Prieto, C., Doneva, M., Usman, M., Henningsson, M., Greil, G., Schaeffter, T. and Botnar, R. M. (2015), Highly efficient respiratory motion compensated free-breathing coronary mra using golden-step Cartesian acquisition. J. Magn. Reson. Imaging, 41: 738–746. doi: 10.1002/jmri.24602

Figures

Figure 1. Pulse sequence diagram for consisting of interleaved 3D saturation and 2D Cartesian imaging with simultaneous multi-slice excitation. Phase encodes are collected in a 3D z-ky space utilizing golden ratio schedule, which is interleaved in time.

Figure 2. Z/time sampling strategy for excited slices. The excite position (2a) varies linearly and repeatedly scans the imaging volume. Viewed in the y-time axis, this results in the mixing of two imaging volumes in a y vs. combined z/time plane (2b); which can be unmixed with coil information (2c).

Figure 3. Moving phantom study images shown with and without slice-SENSE unwrapping (1a) demonstrating the temporal mixing and unmixing of image data. When compared to 2D and 3D imaging the simultaneous multi-slice approach achieves better image contrast with fewer artifacts; although images remain geometrically distorted.

Figure 4. In-vivo DCE images shown in the acquired sagittal plane. Images demonstrate resilience to motion, even cardiac motion with the clear depiction perfusion to the myocardium.

Figure 5. Sagittal sliding slice images reformatted in the coronal plane. Reconstructed images without post-processing clearly depict respiratory motion which manifests as waves in the dome of the liver and pulmonary arteries. Preliminary non-rigid registration applied only in the coronal plane demonstrates near complete correction of this artifact.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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