Fei Han1, Ziwu Zhou1, Paul J Finn1, and Peng Hu1
1Radiology, University of California, Los Angeles, Los Angeles, CA, United States
Synopsis
Cardiac-phase-resolved 4D MR angiography (MRA) is a
promising technique for evaluating patients with cardiovascular disorder.
However, current approaches usually has low scan efficiency (20-40%) due to the
gating based respiratory motion compensation and therefore suffered from
prolonged yet unpredictable scan time. In this work, we proposed a motion
correction strategy in which complex non-rigid respiratory motion is modeled using
voxel-based linear translations, which are estimated using 3D image
registration. Our preliminary result shows that
the proposed technique could compensate for complex motion across the large
field-of-view of 4D MRA and potentially improve the scan efficiency by
including more k-space data in the reconstruction. Purpose
Cardiac-phase-resolved 4D MR angiography (MRA)
is a promising technique for evaluating patients with cardiovascular disorders
1.
The reconstructed 4D dataset enables retrospective interrogation of vascular
anatomies in arbitrary 2D orientation and in different cardiac phases. Respiratory
motion compensation is required in these applications because the time of
acquiring the 4D dataset is usually too long for breath-holds. However, the
majority of existing respiratory motion compensation methods are based on
gating in which only data acquired during certain respiratory state is used in
image reconstruction. Therefore, conventional 4D MRA scans usually have
relative low scan efficiency of 20%-40% and suffer from extended yet
unpredictable scan time.
To
address this issue, we proposed a technical strategy of respiratory motion
correction for 4D MRA acquisition. In the proposed strategy, respiratory motion
is modeled as non-rigid deformable motion rather than translational or affine
transformation
2, which is usually invalid across the large
field-of-view of 4D MRA. Meanwhile, image registration technique is used to quantitatively
estimate the pixel-wise motion vector fields. We expect the proposed method
could remove the motion artifacts when k-space data acquired in more than one
respiratory state is used for reconstruction and thus potentially improve the
scan efficiency of 4D MRA acquisitions.
Methods
(1) Data Acquisition and
Binning: The data is acquired using ROtating Cartesian K-space (ROCK) method (Fig.1) where kykz views of 3D Cartesian grid were reordered using
quasi-spiral pattern with successive arm rotates by golden ratio of 2π. The
ROCK pattern allows the acquired data to be retrospectively binned into
different respiratory states based on a motion surrogate while the k-space
integrity in each bin is maintained, as shown in Fig.1. Each under-sampled k-space
bin is reconstructed into 3D images using ESPIRiT3 algorithm. In our
example, the self-gating signal derived from k-space centerline was used as the
respiratory motion surrogate.
(2) Motion Vector Field Estimation: Quantitative motion field estimation is performed between a
chosen "reference bin" and other "correction bins" using 3D
non-rigid image registration, generating a voxel-wise 3D motion vector field.
Motion vectors are then processed using k-means clustering and represented by
fewer approximations for reduced computational cost in the following step as
shown in Fig.2. In our example, the open source Elastix toolbox was used for
image registration and N=50 was chosen for the motion vector clustering.
(3) K-Space Correction: Linear k-space phase corrections are performed based on each
motion vector on the "correction bin", which are then combined with
the “reference bin” respectively. This process results in N combined k-space,
each will be reconstructed into 3D images candidates using ESPIRiT. The final
respiratory motion-free images are generated by pixel-based image fusion of the
N motion corrected image candidate, where the selection is made based on the respective
estimated motion vector.
(4) Validation: The proposed
method was applied on a ferumoxytol-enhanced free-breathing 4D MRA dataset
acquired on a 1 year old pediatric patient under general anesthesia with
mechanical ventilation. The original scan takes 6 minutes to a matrix size of
500x240x120x6 in 1mm3 isotropic resolution. Only data acquired in the first 4
minutes are included in this study to generate more under-sampling and demonstrate
the potential increase in scan efficiency. K-space data was retrospectively binned into 2
respiratory states and the under-sampling rate of each bin was ~12X.
Results
The motion correction algorithm is finished in less than 2
hours for a single cardiac phases using a standard PC. The motion corrected
image (Fig.3c) has higher visual SNR than the ones reconstructed from single respiratory
state (Fig.3a) because nearly double the data is used in reconstruction. When
compared with the images reconstructed by directly combine k-space from 2
respiratory states without any correction (Fig.3b), diaphragm and vascular
structures are better defined in the motion corrected images. Also note the
vascular structures in the head, chest and abdomen are uniformly sharper than
the uncorrected ones, although the direction and magnitude of their respective
motion is different. This suggest the proposed technique is capable of correcting
non-rigid respiratory motion across large field-of-view.
Conclusion
Our preliminary result demonstrated that the proposed method
could correct for complex non-rigid respiratory motion in 4D MRA applications.
The scan efficiency could potentially be increased since more k-space data is
used in the reconstruction.
Acknowledgements
NIH 1R01HL127153References
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