Laura Lewis1,2, Kawin Setsompop2,3, Bruce R Rosen2,3, and Jonathan R Polimeni2,3
1Society of Fellows, Harvard University, Cambridge, MA, United States, 2Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Boston, MA, United States, 3Department of Radiology, Harvard Medical School, Boston, MA, United States
Synopsis
Recent
work has suggested that fMRI can detect neural activity on faster timescales
than previously thought. We tested the temporal limits of fMRI using oscillating
visual stimuli to generate an oscillatory neural response in human visual
cortex. Using rapid (TR=227 ms) fMRI acquisition at 7 Tesla, we were able to
detect 0.75 Hz oscillations in visual cortex that were an order of magnitude
larger than predicted by canonical linear models. Using the balloon/Windkessel
model we show that continuous and rapidly varying neural activity can generate
larger fMRI signals than expected. We conclude that fMRI can be used to measure
oscillations of up to at least 0.75 Hz, and suggest alterations to hemodynamic
response models for experiments studying continuous and rapidly varying neural
activity.Introduction
Oscillatory neuronal activity above 0.1
Hz plays an important role in coordinating the function of large-scale brain
networks. fMRI has typically been used to measure slow timescale neural
activity, as the hemodynamic response is generally thought to be sluggish.
However, recent studies have suggested that the BOLD signal may contain faster
dynamics than previously realized [1,2]. Here we use ultra high field imaging to
test the limits of this temporal resolution, and study the physiological basis
of detectability of high frequency oscillations using fMRI.
Methods
Five subjects gave informed consent and were scanned on a 7T
Siemens whole-body scanner with a custom-built 32-channel head coil array. Each
session began with a 0.75 mm isotropic multi-echo MPRAGE. Functional runs were
acquired as single-shot gradient-echo blipped-CAIPI SMS-EPI [3] with 15 oblique
slices with 2 mm isotropic resolution targeting the calcarine sulcus (R=2 acceleration, MultiBand factor=3, matrix=120x120,
CAIPI shift=FOV/3, TR=227 ms, TE=24 ms, echo-spacing=0.59 ms, flip angle=30°).
Stimuli consisted of a 12 Hz counterphase flickering radial checkerboard displayed
for 4 minutes. The luminance contrast of the stimulus oscillated at either 0.2
Hz or 0.75 Hz. The first run with a stimulus oscillating at 0.2 Hz was used as
a functional localizer to identify the stimulated region of V1, which was then
taken as the ROI for analysis of subsequent runs. This localizer run was also
used to define the phase of individual response, with early and late-responding
voxels defined as the 33% earliest and 33% latest voxels. A control ROI in gray
matter that was not visually driven was manually defined. Data were
slice-timing corrected, motion corrected, and high-pass filtered, and triggered
responses to the oscillatory stimulus were computed by upsampling the BOLD
timecourse and averaging it on every cycle of the oscillation. The response of
linear canonical models was measured by convolving the stimulus function with
the SPM hemodynamic response function. The balloon model was simulated using
equations from [4], and the parameter set drawn from [5], using Matlab.
Results
The stimulus oscillating at 0.75 Hz
resulted in a robustly detected BOLD oscillation in V1, with a steady-state
amplitude 1.3% the size of the response to a 0.2 Hz stimulus (Fig. 1a,b). No
oscillation was detected in a nearby gray matter ROI that was not visually
driven (Fig. 1c,d), suggesting that the oscillation reflected neural activity
rather than motion or physiological noise. The linear canonical model predicted
that this steady-state oscillation would be 0.14% the size of the response at
0.2 Hz, indicating that these results were an order of magnitude larger than
predicted by standard models (Fig. 2e). Simulations with the balloon model
demonstrated that two factors could contribute to the larger response at high
frequencies. When the time constant for the viscoelastic effect (tau_v) is set
to large but physiologically plausible values [4,6], brief stimuli elicit narrower
BOLD responses, which lead to increased high-frequency content (Fig. 2b-c). In
addition, the presence of continuous ongoing activity could lead to higher
baseline flow and thus a lower mean transit time, which would also cause a
faster BOLD response (Fig. 2d). Finally,
we conducted additional analyses examining individual voxel responses and
observed that voxels with early and late responses could be consistently
observed at both stimulus frequencies. The lag did not hinder detection of
oscillations at 0.2 Hz (Fig. 3a) but introduced substantial phase cancellation
at 0.75 Hz (Fig. 3b). The delay found in individual voxels did not vary
smoothly across cortex (Fig. 3c), suggesting that spatial smoothing or low
spatial resolution scans can interfere with the ability to detect oscillatory
BOLD responses at high frequencies. Analyzing the early-responding voxels alone
increased the amplitude of the detected oscillations by 60%, relative to
averaging across the ROI.
Discussion
We found that fMRI can detect
oscillations of up to at least 0.75 Hz in individual subjects and in single
sessions. The fMRI response was ~10 times larger than predicted by canonical
linear models, suggesting that alternate hemodynamic models should be used when
neural activity is continuous and rapidly varying, rather than driven by long
stimuli and long interstimulus intervals. Previous studies have demonstrated
that individual voxels can exhibit relative vascular delays of hundreds of
milliseconds [7] and our results suggest that these delays can introduce phase
cancellation of these oscillations, suggesting an additional
benefit to using small voxel sizes to study these effects. These data suggest
that fMRI could be used to localize 0.1-0.75 Hz oscillations in the human
brain, and help identify neurovascular dynamics that can be taken into account when analyzing fast fMRI data.
Acknowledgements
This
work was funded by the Athinoula A. Martinos Center for Biomedical Imaging, NIH
K01-EB011498 and R01-EB019437
to J.R.P., a fellowship from the Harvard Society of Fellows to L.D.L., and NIH NIBIB
P41-EB015896 and NCRR shared resource instrumentation grants S10-RR023401, S10-RR023403
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