Synopsis
We propose a new MR experiment called diffusion-relaxation correlation
spectroscopic imaging (DR-CSI). DR-CSI
acquires imaging data across a range of different b-value and echo time
combinations, and then performs regularized reconstruction to generate a 2D
diffusion-relaxation correlation spectrum for every voxel. The peaks of this spectrum correspond to the
different tissue microenvironments that are present within each macroscopic
imaging voxel, which provides powerful insight into the tissue microstructure.
Compared to standard relaxometry or diffusion imaging, DR-CSI provides unique
capabilities to resolve tissue compartments that have similar relaxation or
diffusion parameters. DR-CSI is
demonstrated with spinal cord traumatic injury MRI data.Purpose
MR relaxometry and diffusion imaging have each been proposed
as methods that can probe microscopic tissue compartments using standard
millimeter-scale spatial resolution. For
example, relaxometry can be used to estimate the amount of myelin content
within a voxel [1,2], while diffusion imaging can be used to quantify the
neurite density, the size of the extracellular space, and the presence of edema
[3-5]. However, both of these modalities
are subject to ambiguities and confounds whenever the diffusion or relaxation
parameters of two distinct tissue microenvironments are too similar to one another.
Diffusion-relaxation
correlation spectroscopy (DR-COSY) is a (single-voxel, non-imaging) 2D
spectroscopic method that encodes diffusion and relaxation parameters jointly,
and substantially improves the ability to distinguish different tissue
compartments [6-9]. This work proposes
and evaluates a novel imaging extension of DR-COSY, which we name
diffusion-relaxation correlation spectroscopic imaging (DR-CSI). Enabled by regularization strategies that
help to overcome the ill-posedness of the problem, DR-CSI provides a 2D
spectrum of information for every voxel.
The peaks of this 2D spectrum can be integrated and displayed as spatial
maps of the different tissue microcompartments as they vary across the
field-of-view. The potential usefulness
of DR-CSI is illustrated using ex vivo mouse spinal cord traumatic injury data.
Methods
Diffusion-relaxation
data acquisition: We acquired 28 different simultaneously diffusion-
and relaxation-encoded images.
Specifically, we acquired 7 different b-values (b = 0, 500, 1000, 2000,
3000, 4000 and 5000 s/mm2), and measured data at 4 different echo
times for each b-value (TE = 40, 80, 120 and 160 ms). We acquired six ex vivo mice spinal cord data sets (three sham controls and three
with traumatic spinal cord injury as described in [10]).
Diffusion-T2
correlation spectral analysis: We modeled the measured DR-CSI signal as a mixture
of 2D exponential decays: $$M(x,y,b,TE) =\int \int F(x,y,D,T_{2})~e^{-bD}e^{-\frac{TE}{T_{2}}}~dD~dT_{2}, $$ where $$$M(x,y,b,TE)$$$ is the measured data at spatial position $$$(x,y)$$$, diffusion encoding $$$b$$$, and echo time $$$TE$$$, and $$$F(x,y,D,T_{2})$$$ is the
spatially-varying diffusion-relaxation correlation spectrum as a function of
the diffusion coefficient $$$D$$$ and relaxation parameter $$$T_{2}$$$. Conventionally,
2D inverse Laplace transforms have been used to estimate 2D DR-COSY spectra [11]. However, these approaches typically require a
larger number of diffusion-relaxation encodings and higher SNR, which is only
practical with the large voxel sizes that are common in spectroscopic
applications. To enable DR-CSI with a
smaller number of encodings and lower SNR, we performed regularized 2D spectrum
estimation using the prior information that $$$F(x,y,D,T_{2})$$$ is nonnegative and will exhibit smooth spatial variation. Based on these assumptions, $$$F(x,y,D,T_{2})$$$ was estimated by solving a dictionary-based spatially-regularized
nonnegative least squares optimization problem.
To reduce computational
complexity for this high-dimensional optimization problem, we designed an
efficient reconstruction algorithm based on variable splitting and the
alternating direction method of multipliers [12].
Results
Figure 1 shows spatially-averaged DR-CSI spectra for
control and injured spinal cords. The control
spectrum has two distinct well-resolved peaks, as well as a third weaker peak
in between. In contrast, the spectrum for
the injured cord contains an additional peak that was not present in the
control spectrum. Importantly, these
distinct peaks are only well-resolved in the 2D spectra, while there is
considerable ambiguity in the 1D diffusion-only and relaxation-only spectra
which resolve substantially fewer peaks.
Figure 2 shows spatial maps of the integrated
spectral peaks from Fig. 1. This figure
shows that the estimated peaks from Fig. 1 seem to correspond to tissue
microenvironments that are consistent with the known anatomy of the spinal
cord. Specifically, one of the peaks
appears to correspond to white matter (WM), one appears to correspond to
ventral gray matter (VGM), one appears to be present in both the dorsal gray
matter and the white matter to a lesser degree (DGM), and one seems specific to
the injured cords (injury). It should be
noted that these spatial maps have considerable spatial overlap, demonstrating
that DR-CSI can successfully disentangle partial volume contributions from
multiple tissue compartments within the same voxel. This is illustrated even further in Fig. 3,
which shows spatially-varying spectra from the WM-GM boundary, as the tissue
transitions between WM and VGM.
Discussion and Conclusion
We have proposed a novel approach
to imaging tissue microstructure with enhanced capabilities for identifying
distinct tissue microcompartments, and have demonstrated its potential in both
healthy and injured tissues. We expect the
DR-CSI technique substantially expand the usefulness of MR relaxometry and
diffusion imaging for studies of tissue microstructure.
Acknowledgements
This work was supported in part by NSF CAREER award CCF-1350563 and NIH grant R01-NS089212.References
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