Rad-Path correlation and machine learning generate epithelium density maps predictive of pathologically confirmed prostate cancer
Amy L. Kaczmarowski1, Kenneth Iczkowski2, William A. Hall3, Ahmad M. El-Arabi4, Kenneth Jacobsohn4, Paul Knechtges1, Mark Hohenwalter1, William See4, and Peter S. LaViolette1

1Radiology, Medical College of Wisconsin, Milwaukee, WI, United States, 2Pathology, Medical College of Wisconsin, Milwaukee, WI, United States, 3Department of Radiation Oncology, Medical College of Wisconsin, Milwaukee, WI, United States, 4Urology, Medical College of Wisconsin, Milwaukee, WI, United States

Synopsis

Radiological-pathological correlation is being used to validate prostate cancer imaging technology. This study combines these two modalities with machine learning to generate predictive maps of histological features (i.e. new contrasts) based on segmented histology. We find that epithelium density maps highlight regions pathologically confirmed as Gleason grade ≥3. This allowed the prediction of prostate cancer presence based solely on non-invasive imaging in 23 of 26 cases.

Purpose

Radiological-pathological (Rad-Path) correlation has recently allowed the validation of prostate cancer imaging technology1,2. Multiparametric MRI (MP-MRI) has shown to be highly accurate at locating targets for biopsy3. However, difficulties still remain in this method of prostate cancer detection and grading4,5. We present a new technique that combines the two cross-modal datasets of MP-MRI and the gold standard, pathological grading, with machine learning to generate predictive maps of histological features. These maps can be used to predict prostate cancer presence with non-invasive imaging alone.

Methods

Between October of 2014 and September of 2015, twenty-six patients undergoing prostatectomy were imaged <2 weeks pre-op using a 3T MRI machine (GE) and MP-MRI. This included diffusion imaging with 10 b-values, dynamic contrast enhanced (DCE) and T2 weighted imaging. We designed and used custom 3D-printed patient-specific slicing molds to section the prostates in the same orientation as the imaging was acquired6,7. Whole-mount sections were paraffin-embedded, H&E stained, digitized, and contoured using custom code developed in Matlab (Mathworks Inc). Segmentation features included lumen, stroma, and epithelium/nuclei (Figure 1). Digitized histology was co-registered to the T2-weighted MRI using Matlab software and non-linear warping (Figure 2). A partial least squares regression (PLS) machine-learning algorithm was trained with co-localized MRI voxel values and corresponding histology features. A leave one out approach was used to generate predictive maps of each of the three histological features (lumen, stroma, and epithelium/nuclei) for each patient using the histology and corresponding MRI values from all other patients (Figure 3). Maps of each feature were then compared to Gleason (G) graded whole mount histology, performed by a board-certified pathologist.

Results

All 26 patients had benign/atrophic glands and areas of G3 cancer. Twenty patients had regions of G4 and three patients had G5 nodules. Quantitative MRI-derived PLS trained maps of epithelium/nuclei were more predictive of the location of cancer than those of stroma and lumen (Figure 4). In 6 of 6 patients with G3 alone, the epithelium density maps indicated high percentage regions that co-localized with the pathologically confirmed G3 cancer. Likewise, in 17 of 20 G4 cases and all three patients with G5 cancer, abnormally high epithelium percentages co-localized with the pathologically confirmed regions (Figure 4).

Conclusion

We generated machine learning trained maps of histological features based on non-invasive quantitative MR imaging. We found that locations with high epithelium/nuclei density indicated regions of G3+ cancer. More research is necessary to determine how this new machine learning based biomarker should be used for diagnostic purposes.

Acknowledgements

Advancing a Healthier Wisconsin

State of Wisconsin Tax Check Off Program for Prostate Cancer Research

NCI U01-CA176110-01A1

References

1. Nagarajan R, Margolis D, Raman S, et al. Correlation of Gleason scores with diffusion-weighted imaging findings of prostate cancer. Advances in urology. 2012;2012:374805.

2. Mazaheri Y, Hricak H, Fine SW, et al. Prostate tumor volume measurement with combined T2-weighted imaging and diffusion-weighted MR: correlation with pathologic tumor volume. Radiology. 2009;252(2):449-457.

3. Panebianco V, Barchetti F, Sciarra A, et al. Multiparametric magnetic resonance imaging vs. standard care in men being evaluated for prostate cancer: a randomized study. Urologic oncology. 2015;33(1):17 e11-17.

4. Panebianco V, Barchetti F, Barentsz J, et al. Pitfalls in Interpreting mp-MRI of the Prostate: A Pictorial Review with Pathologic Correlation. Insights into imaging. 2015.

5. Notley M, Yu J, Fulcher AS, Turner MA, Cockrell CH, Nguyen D. Diagnosis of recurrent prostate cancer and its mimics at multiparametric prostate MRI. Br J Radiol. 2015;88(1054):20150362.

6. Priester A, Natarajan S, Le JD, et al. A system for evaluating magnetic resonance imaging of prostate cancer using patient-specific 3D printed molds. American journal of clinical and experimental urology. 2014;2(2):127-135.

7. Turkbey B, Mani H, Shah V, et al. Multiparametric 3T prostate magnetic resonance imaging to detect cancer: histopathological correlation using prostatectomy specimens processed in customized magnetic resonance imaging based molds. The Journal of urology. 2011;186(5):1818-1824.

Figures

Figure 1. Example of whole mount prostate segmentation into histological features: lumen, stroma, and epithelium/nuclei.

Figure 2. Example of control point co-registration with non-linear warping.

Figure 3. Procedure for generating predictive maps of histological features with partial least squares regression (PLS) and machine learning.

Figure 4. Histological feature maps and MR images from two representative patients compared to graded whole mount histology. Increased epithelium density colocalizes well with high-grade prostate cancer.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
0583