A Free-breathing water/fat separation and T1, T2 quantification method using dual TR FISP in abdomen
Dongyeob Han1, Min-Oh Kim1, Honpyo Lee1, Taehwa Hong1, and Dong-Hyun Kim1

1Yonsei University, Seoul, Korea, Republic of

Synopsis

A simultaneous, free-breathing water/fat separation and T1, T2 quantification method was proposed. Dual TR (in-phase and out-phase TR) and varying sinusoidal flip angle was used with FISP acquisition. For motion robustness, random rotating golden angle trajectories were applied. T1, T2 and Δφfat of fat were pre-determined using the fat dominant region mask, then water/fat signal combined dictionary was generated. The results show that the water/fraction maps from the proposed method were in good agreement with conventional breath-hold results. Furthermore, measured T1, T2 values were in good agreement with the values from the previous research.

Purpose

In abdomen imaging, several problems such as motion and B0 field inhomogeneity hinder accurate diagnosis and cause imaging artifacts. Often, the fat signal is separated based on techniques originating from the Dixon method1. The gating methods2 or fast imaging methods3 with single breath-hold are used to overcome the motion artifact. Herein, to acquire water/fat fraction and T1, T2 quantification simultaneously without these limitations, a dual TR FISP with random rotating golden angle radial acquisition while free breathing was proposed.

Methods

Figure 1 shows the proposed algorithm. In the data acquisition step, dual TR pattern with alternating in-phase TR (4.6 ms) and out-phase TR (6.9 ms) and varying sinusoidal flip angle pattern were applied with FISP (unbalanced SSFP) acquisition scheme which is robust to B0 field inhomogeneity4. Random rotating golden angle radial trajectories5 were also applied to grant incoherency of undersampling artifacts and motion robustness. A total of 600 highly undersampled (16 spokes for each images, reduction factor 8) 2D images were acquired in 3T Siemens scanner (Tim Trio) with 2x2mm2 resolution, TE=TR/2, 256x256 mm2 FOV, 5 mm slice thickness and 1560 Hz/Px bandwidth for a scan time 54 sec/slices.

To generate water/fat signal combined dictionary, fat's T1, T2 and Δφfat (phase difference between in-phase TR and out-phase TR due to chemical shift of fat) were pre-determined with an assumption that the fat's T1, T2 and Δφfat values are uniform in the subject. Fat dominant region mask was generated from the difference between the average phase images acquired from in-phase TR and out-phase TR as shown in Fig. 1. An average fat signal was acquired using the fat dominant region mask, then T1, T2 and Δφfat of the subject's fat were pre-determined. Finally, water/fat signal combined dictionary was generated based on a water signal dictionary applying complex sum of the fat signal evolution which was pre-determined. The water/fat dictionary has water fraction : [0:0.05:1], water T1 : [500:25:1980, 2000:200:3000] ms and water T2 : [5:5:145, 150:50:250] ms.

To validate the proposed method, single breath-hold (exhale) multi-echo GRE was acquired with TE : 2.2, 3.0, 3.8 ms, TR : 6.1 ms and FA : 18˚ with same FOV and resolution from the above. For water/fat separation, a graph cut based method6 was applied. Furthermore, an additional breath-hold experiment was performed using the proposed dual TR FISP pulse sequence to validate the motion robustness of random rotating golden angle trajectories. The data was collected during 16 breath-hold (exhale) states (breath-hold duration 600 TRs=3.4 sec) which were synchronized with the pulse sequence. All experiments were performed with a healthy volunteer (IRB-approved) in both axial and sagittal slices.

Results

Figure 2 and 3 shows the results of the proposed method for each axial and sagittal slices. Water/fat fraction maps from the proposed method are in good agreement with the fraction maps from the multi-echo gradient echo data in both axial and sagittal slices. Signal evolutions in point 'x' shows that there are no meaningful difference between the signal evolution pattern of breath-hold and free breathing. This signal evolution results and comparison results shown in Figures 2 and 3 between breath-hold and free-breathing shows that the random rotating golden angle trajectories can successfully reduce the motion artifacts due to the respiratory motion. Furthermore, ROI-averaged T1 and T2 values in the liver from the proposed free-breathing method are T1 : 726 ms and T2 : 52 ms, which are in good agreement with previous known T1, T2 values in liver3.

Discussion & Conclusion

The proposed method based on the random rotating golden angle radial acquisition and dictionary matching method can successfully suppress motion artifacts arising from respiration. However, further analysis for non-periodic or hard-breathing respiratory motion is required, due to all experiments being performed with a healthy volunteer in this study.

Streaking artifact due to strong flow signal from the aorta was shown in the results. Additional flow suppress preparation technique may also required.

We have presented a simultaneous water/fat separation and T1, T2 quantification method using dual TR FISP with random rotating golden angle radial trajectories while free breathing in the abdomen. The method would be useful for patients who cannot maintain breath-hold and also for quantification research in the abdomen.

Acknowledgements

This research was supported by Global PH.D Fellowship Program through the National Research Foundation of Korea(NRF) funded by the Ministry of Education (NRF-2015H1A2A1030698).

References

1. Dixon WT. Simple proton spectroscopic imaging. Radiology 1984; 153: 189-194.

2. Ehman RL, McNamara MT, Pallack M, Hricak H, Higgins CB. Magnetic resonance imaging with respiratory gating: techniques and advantages. American Journal of Roentgenology 1984;143:1175-1182.

3. de Bazelaire CM, Duhamel GD, Rofsky NM, Alsop DC. MR imaging relaxation times of abdominal and pelvic tissues measured in vivo at 3.0 T: preliminary results 1. Radiology 2004;230:652-659.

4. Jiang Y, Ma D, Seiberlich N, Gulani V, Griswold MA. MR fingerprint-ing using fast imaging with steady state precession (FISP) with spiralreadout. Magn Reson Med 2014. doi: 10.1002/mrm.25559.

5. Winkelmann S, Schaeffter T, Koehler T, Eggers H, Doessel O. An optimal radial profile order based on the Golden Ratio for time-resolved MRI. Medical Imaging, IEEE Transactions on 2007;26:68-76.

6. Hernando D, Kellman P, Haldar J, Liang ZP. Robust water/fat separation in the presence of large field inhomogeneities using a graph cut algorithm. Magnetic Resonance in Medicine 2010;63:79-90.

Figures

Figure 1. The proposed sinusoidal flip angle and dual TR patterns with random rotating golden angle radial trajectories (Data acquisition part). Processing scheme of the proposed water/fat signal combined dictionary generation method (Dictionary part).

Figure 2. In vivo abdomen axial slice results.

Figure 3. In vivo abdomen sagittal slice results.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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