Evgeniya Kirilina1,2, Juliane Dinse1, Pierre-Louise Bazin1, Carsten Stueber3,4, Stefan Geyer1, Robert Trample1, Andreas Deistung5, Juergen R Reichenbach5, and Nikolaus Weiskopf1,6
1Neurophysics, Max Plank Institute for Human Cognitive and Brain Science, Leipzig, Germany, 2Neurocomputation and Neuroimaging Unit, Department of Educational Science and Psychology, Free University Berlin, Berlin, Germany, 3Department of Radiology, Weill Cornell Medical College, New York, NY, United States, 4Department of Neurology, Yale School of Medicine, Yale University, New Haven, CT, United States, 5Medical Physics Group, Jena University Hospital - Friedrich Schiller University Jena, Jena, Germany, 6Wellcome Trust Centre for Neuroimaging, University College London, London, United Kingdom
Synopsis
Subcortical white matter (SWM) incorporates U-fibers, the
intra-hemispheric connections between adjacent gyri. Despite their
importance for cortical connectivity little is known about the U-fiber
distribution in humans due to the lack of appropriate imaging methods.
Herein we investigate SWM using high-resolution in-vivo MRI at 7T. A
clear-cut discrimination of SWM from the adjacent brain regions was
obtained based on higher qR2*, qR2 and susceptibility in-vivo. These new
findings may pave the way for future in-vivo segmentation strategies for
this crucial brain region as well as potential U-fiber density mapping in
humans.PURPOSE
Subcortical
white matter (SWM) is a thin layer of white matter (WM) residing just
below the cortical sheet. Its structure,
metabolism and function differ
substantially
from deep WM. Importantly, SWM incorporates short association fibers,
the intra-hemispheric connections between adjacent gyri, referred to
as U-fibers. Despite their importance for cortico-cortical
connectivity little is known about the density and distribution of
U-fiber in humans
1
mainly due
to the lack of appropriate imaging
methods. In humans invasive tracer studies are not applicable and
DTI-based tractography does not yield satisfactory results in SWM
2.
Several SWM contrasts has been demonstrated with structural MRI
ex-vivo at 1.5T
3
and 7T
4
and in-vivo at 7T
5,
but no study has fully explored the potential of high-resolution
ultra-high field structural SWM mapping in-vivo yet. Thus, we
investigate four contrasts in SWM ((i) quantitative
transverse and (ii) effective transverse relaxation rates (qR
2 and
qR
2*), (iii) longitudinal relaxation rate (qR
1) and (iv) quantitative
susceptibility
maps (QSM)) using high-resolution in-vivo MRI at 7T. We show that SWM
qR
2*, qR
2 and QSM exhibit strong contrast to both grey matter (GM)
and deep WM. Iron and iron reach cells were identified as the
intrinsic contrast agents by comparing the in-vivo data with ex-vivo
MR imaging and quantitative iron maps acquired with proton induced
X-ray emission (PIXE).
METHODS
MR
measurements were performed on a whole body 7 T Siemens MRI scanner.
qR
2* and qR
1 maps with an isotropic resolution of 0.5 mm were sourced
from a recently published repository and analysed
6.
qR
1 maps were co-registered in the coordinate space of the qR
2* maps
using 0.6 mm resolution R
2* and T
1-weighted images, acquired in a
separate session. WM and GM regions were segmented based on the
co-registered qR
1 maps
7.
For two participants QSM were reconstructed with the HEIDI algorithm
8
employing phase images of an additional multi-echo gradient-echo
(GRE) acquisition (0.5 mm isotropic). For one volunteer an
additional multi-echo spin-echo data set (0.5 in plane resolution, 1
mm slices) has been acquired and used for calculating transverse
relaxation rate (qR
2) maps.
To
better understand the in-vivo maps, post mortem tissue samples were
additionally investigated with T
2*-weighted imaging (FLASH, 80 μm
isotropic resolution) and qR1 mapping (MP2RAGE, 200 μm
resolution, occipital pole, 92 y, f, postmortem time before fixation
22 hours) as well as quantitative iron mapping with PIXE (primary
motor and sensory cortex, 82 y, f, postmortem time before fixation 8
h)
9.
RESULTS
High-resolution
in-vivo 7T MRI revealed a thin (0.5-2 mm) hyperintense layer below
the GM-WM border on qR
2, qR
2*, and QSM maps (see Figs.1 and 2),
indicating SWM. qR
2 (ΔR
2=8±3 s
-1), qR
2* (ΔR
2*=15±5
s
-1), and magnetic susceptibility (Δχ=25±5
ppb) values in this layer were significantly higher than in deep WM.
Interestingly, the increase in qR
2, qR
2*, QSM was found to be more
prominent in sulcal fundi and walls as compared to the gyral crowns.
Similar
findings were observed on the ex-vivo tissue sample, where SWM again
exhibited as a thin contrast-rich layer with decreased signal
intensities on T2*-weighted images and hyperintense in qR
1 (ΔR
1=0.4±0.1 10
-3 s-1) maps (see
Fig. 3), below the GM-WM border. Contrast between SWM and deep WM was
found to be stronger, than the intra-cortical contrast in both T
2*-weighted and qR
1 images. Iron quantification yielded increased iron
levels within a 1 mm thick SWM layer below the GM-WM boarder, whereas
iron content has been determined to be 355
± 30 μg,
255
± 50 μg,
92
± 30 μg
per g dry brain tissue in SWM, GM, and WM, respectively.
CONCLUSION
Utilizing
the superior resolution provided by 7 T MRI we were able to image SWM
in in-vivo and in post-mortem brain tissue samples at the WM-GM
interface. A clear-cut discrimination of SWM from the adjacent brain
regions was obtained based on higher qR
2*, qR
2 and susceptibility in
in-vivo tissue and higher qR
2* and qR
1 in ex-vivo tissue as compared
to both GM and deep WM. We found the SWM contrast to be even higher
than the GM-WM contrast as well as intra-cortical grey matter
contrast. The higher R
2, R
2*, and susceptibility values indicate iron
complexes and iron reach cells in SWM as dominating biophysical
contrast source and is further supported by the elevated iron
concentrations in SWM measured with PIXE. These new findings are of
paramount importance and may pave the way for future in-vivo
segmentation strategies for this crucial brain region as well as
potential U-fiber density mapping in humans.
Acknowledgements
No acknowledgement found.References
1. Oishi
K et
al.
Superficially Located White Matter Structures Commonly Seen in the
Human and the Macaque Brain with Diffusion Tensor Imaging. Brain
Connect. 2011;1:37–47
2. Reveley
C et
al.
Superficial white matter fiber systems impede detection of long-range
cortical connections in diffusion MR tractography. PNAS. 2015;112:2820–2828.
3. Curnes
J et al. MR imaging of
compact white matter pathways. Am J Neuroradiol, 1988;
9:1061–1068.
4. Bagnato
F et
al.
Tracking iron in multiple sclerosis: a combined imaging and
histopathological study at 7 Tesla. Brain. 2011;
134:3602–3615.
5. Deistun
A. et
al.
Toward in vivo histology: a comparison of quantitative susceptibility
mapping (QSM) with magnitude-, phase-, and R2*-imaging at ultra-high
magnetic field strength. Neuroimage
2013;65:299–314.
6. Tardif
C et
al.
Open Science CBS Neuroimaging Repository: Sharing ultra-high-field MR
images of the brain. Neuroimage. 2015;doi:10.1016/j.neuroimage.2015.08.042
7. Bazin
P-L et
al.
A computational framework for ultra-high resolution cortical
segmentation at 7Tesla. Neuroimage. 2014;
93(2):201–209.
8. Schweser F. et al. Quantitative
susceptibility mapping for investigating subtle susceptibility
variations in the human brain. Neuroimage. 2012;62:2083–2100.
9. Stüber
C et
al.
Myelin and iron concentration in the human brain: A quantitative
study of MRI contrast. NeuroImage. 2014;93(1):95–106.