Synopsis
We present the utility of a under-sampled single-shot turbo spin-echo (TSE) sequence for high resolution T2 mapping and imaging of the lungs using hyperpolarized carbon-13 agents. We then demonstrate the possibility of using this sequence selectivity excite different carbon-13 species via a minimum-phase frequency-selective excitation pulse.Introduction
Lung
MRI suffers from low tissue density and severe field inhomogeneity due to the air-tissue
interface, resulting in prohibitively short T
2* relaxation times
[1]. However, the reported T
2 relaxation time constants in the lungs
are considerably longer [2]. In this study, we demonstrate the utility of a
modified under-sampled single-shot turbo spin-echo (TSE) for carbon-13
hyperpolarized MRI of the lungs. The sequence exploits long T
2
relaxation times to obtain high-resolution carbon-13 images. Although a similar
approach has been used for HP-MRI of the lungs [3], we aim to investigate the
utility of single-shot TSE sequence for chemical shift imaging. First, we
measured the T
2 relaxation time of carbon-13 in the lungs using a
dual-echo single-shot TSE sequence. Then, we used a higher-resolution
single-echo sequence to obtain dynamic high-resolution images. Finally, we
demonstrated the applicability of this sequence to obtaining chemical shift
images using selective excitation in a phantom.
Materials and Methods
Eight BLAB/c mice (25 ± 2 g) were imaged for the in vivo
studies. A venous tail vein catheter was placed and mice were placed in a 9.4T
vertical-bore (Bruker Inc.) micro-imaging MRI system. All images were acquired
using a 25mm
1H/
13C saddle-coil (Bruker Inc.).
Respiration was monitored using a respiration cushion. Proton T
2-weighted
images were acquired over the lungs using a respiratory-gated multi-slice fast spin-echo (FSE) sequence (TR/TE=570/2.3ms, ETL=4, NA=9, 192x192 voxels). 45µL of
[1-
13C]-pyruvate (Cambridge Isotopes) was polarized using a
HyperSense DNP polarizer (Oxford Instruments) to over 15%. The sample was
melted using a dissolution buffer (40mM Trizma, 160mM NaOH, 50mM NaCl, 0.1g/L
EDTA) at 180°C to yield an isotonic solution of 160mM [1-
13C]-pyruvate
with neutral pH at 37°C. Ten seconds after the dissolution a 350µL aliquot was
injected through the tail-vein over 12 seconds. Carbon-13 imaging was performed using a single or
dual-echo under-sampled single-shot TSE sequence (partial fourier=1.68) with
an outwards centric phase encoding table. For the in-vivo studies, a 1ms SLR excitation/flip-back
pulses (α=90°)
and 0.5ms adiabatic refocusing pulses (α=180°) were used.
Four mice were imaged using the dual-echo version of the sequence (TE
1/TE
2=2.98/50.66ms, 32x32 voxels, BW=40KHz, in-plane FOV=25x25mm
2 and
10mm slice thickness) for T
2 mapping and optimizing the timing of the
high resolution sequence (
Figure 1).
The other four mice were imaged using a higher resolution version of the sequence
(TE=2.3ms, 48x48 voxels, BW=40KHz, in-plane FOV=25x25mm
2 3mm
slice thickness). Six images were acquired every 5 seconds (
Figures 2 and
3). To demonstrate the feasibility of chemical shift
imaging a phantom consisting of three 5 mm tubes containing (1) 1.5M [1-
13C]-glycine,
(2) [1-
13C]-sodium propionate and (3) a mixture of both was used (
Figure 4). A modified single-echo single-shot
TSE sequence (TE=9.42ms, echo-spacing = 4.11ms, 48x48 voxels, BW =
40KHz, in-plane FOV=25x25mm
2 and 10mm slice thickness, NA=8) was used. Alternating back-to-back
selective excitation was performed using 9ms excitation/flip-back RF pulses (α=90°) and 2ms adiabatic refocusing pulses
(α=180°). All images
were exported to DICOM format for OsiriX 7.0. T
2 maps were created
from the images acquired using the dual-echo sequence using the T
2 fit
map plugin
Results and
Discussion
Figure 1 shows a
T
2 map in the lungs (T
2 = 71 ± 23ms)
which suggests the possibility of imaging the lungs with minimal blurring for
scan times shorter than 100ms.
Figure 2
shows a 48x48 carbon-13 scan with 0.5x0.5mm
2 in-plane resolution
(total scan time = 68ms). The mean SNR in the lungs was 68.
Figure 3 shows dynamic imaging in
another mouse with 5 seconds temporal resolution. The blurring at (t = 5s) may
be due to a heart-beat coinciding with the scan, which can be resolved by using
a cardiac-gated scan.
Figure 4 shows
the chemical shift images of the carbon phantom acquired with the frequency-selective
version of sequence. For in vivo
applications, the 9ms minimum phase RF pulse provides sufficiently sharp
spectral selectivity (4ppm bandwidth at 9.4T) to image pyruvate and lactate in
vivo as it can exclude the pyruvate-hydrate and alanine peaks. Each single-shot
scan was 121ms, which is short enough to yield high resolution in vivo
metabolic images of the lungs. It is notable that longer T
2
relaxation times in tumors and other organs allows for forming much longer echo
trains after the excitation, which can be used for high-resolution 3D chemical
shift imaging with minimal blurring.
Conclusion
We showed the utility of a modified under-sampled
single-shot TSE sequence for high resolution imaging of hyperpolarized
carbon-13 agents the lungs with excellent signal quality. We further
demonstrated the feasibility of extending this method to obtain high resolution
chemical shift imaging via selective excitation.
Acknowledgements
No acknowledgement found.References
[1] Beckmann N. et al. NMR Biomed., 14(5),297–306,
(2001) [2] Hatabu H., et al. European Journal of Radiology, 29, (2), 152–159,
(1999). [3] Ishii M., et al. Magn. Reson. Med., 57(3), 459–463, (2007).