Synopsis
MR Fingerprinting with Chemical Exchange (MRF-X) is
presented for in vivo quantification of relaxation times, volume fraction, and
exchange rate for tissues with two compartments. Data are presented in healthy
volunteers in both brain and leg skeletal muscle and compared with previously reported measurements.Purpose
Multi-component maps of relaxation times and
water exchange rate are potentially useful for many applications, such as monitoring
myelin degenerating disorders and diffuse fibrosis in the heart, but they are
not routinely acquired. Recently, MR Fingerprinting with Chemical Exchange
(MRF-X) was introduced for simultaneously mapping T
1, T
2,
exchange rate, and volume fraction in voxels with two exchanging pools.
1 Here, we present MRF-X maps acquired in human brain and skeletal muscle.
Methods
Three healthy volunteers underwent a brain MRI
at 3T (Skyra, Siemens Medical Solutions, Erlangen, Germany) in this IRB
approved study. The MRF-X pulse sequence used a FISP-based readout
2,
variable flip angles (0-75 deg), and constant T
R=6.98ms with 3000 RF
excitations. An inversion pulse occurred before RF excitations #1 (TI=21ms),
#1201 (TI=100ms), and #2401 (TI=250ms). Data were sampled with a variable
density spiral having 48 interleaves, matrix size 192x192, and 300mm
2
FoV. The same flip angle and TR pattern was repeated 48 times in order to
fully-sample k-space, with a 10s pause between each repetition to allow for
magnetization recovery (scan time 24min). The MRF-X dictionary was simulated
using the two-pool Bloch-McConnell equations
3. The dictionary had approximately 69 million entries with the following
parameter ranges: T
1A and T
1B =
[50,100:100:2000, 2200:200:3000 3500:500:500]ms, T
2A and
T
2B [5,10:10:100,120:20:200,250,300,400,500,1000]ms,
exchange rate k
AB=[0.01,0.1,0.25,0.5,0.75,1,2,3,5,7,10,15,20,100]s
-1,
and volume fraction of the short species ρ
A=[0:0.02:1].
Quantitative maps were computed by finding the entry in the dictionary that was
most highly correlated with the acquired signal evolution at each image pixel.
The average MRF-X parameter values were computed over twenty ROIs drawn in
white and gray matter. In addition, leg skeletal muscle was scanned in another
healthy volunteer using the same sequence and reconstruction. The average MRF-X
parameter values were determined in ROIs in the soleus, gastrocnemius, and
tibilias anterior muscles.
Results
MRF-X maps in different axial positions in the
brain from two volunteers are shown in Figures 1 and 2. Measurements averaged
over white matter and gray matter from each volunteer are summarized in Table
1. Short (species A) and long (species B) T
1 and T
2
components were observed. Averaged over all volunteers, white matter regions
had a mean exchange rate of 6.8s
-1 (mean residence time 150ms) with 24%
volume fraction for the short species, and gray matter regions had a mean
exchange rate of 0.1s
-1 (little to no exchange) with 75% volume
fraction of the short species (although this component had longer relaxation
values than the short component in white matter). Table 4 summarizes ROI measurements from leg
skeletal muscle in the soleus, tibialis anterior, and gastrocnemius.
Discussion
This work presents the first in vivo use of
MRF-X for simultaneously mapping compartment relaxation times, volume
fractions, and exchange rates. In white matter, the short and long T
2
measurements agree with previously reported values using mcDESPOT.
4 Although the biological nature of the two
compartments observed with MRF-X is only speculated, the volume fraction and
mean residence time in white matter agree with literature values for myelin
residence time (140ms) and myelin water fraction (17-32%).
5 Two non-exchanging species were observed in
gray matter that might be attributed to cellular components (short T
1
and T
2) and CSF (long T
1 and T
2). It should be
noted that the MRF-X measurements may be less precise when the fraction of one
species is very small (e.g. <10%), which could account for noisy patches in
the maps. In addition, brain tissue may be more accurately modeled by adding a third
non-exchanging compartment to model CSF, which could be incorporated in the
MRF-X reconstruction.
6 Previous studies have suggested that skeletal
muscle contains three compartments with 8% short T
2<10ms, 82% T
2=45ms,
and 10% T
2>200ms.
7 The two compartments measured with MRF-X may
correspond to the short and moderate T
2 species, and they have
appropriate volume fractions in soleus and gastrocnemius. The exchange rates
reported in one study
8 are approximately 7.7s
-1, which are
similar to the values determined using MRF-X. Finally, the volume fraction for
the short T
2 species using MRF-X is 2.8 times higher in the tibialis
anterior compared to the gastrocnemius, which is close to the ratio of 3.8
reported by others.
9Conclusion
In this preliminary in vivo
study, it was shown that MRF-X provides multi-compartment relaxation values,
volume fractions, and exchange rates that correspond with literature values in
the brain and skeletal muscle. Given the key role that
these values can play in abnormal tissues, we believe that MRF-X could provide
novel insights into disease states.
Acknowledgements
Siemens
Medical Solutions, NIH T32EB007509, NIH/NIBIB R00EB011527, NIH/NHLBI R01HL094557.References
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