Lea Schroeder1, Jens Wetzl1,2, Andreas Maier1,2, Lars Lauer3, Jan Bollenbeck4, Matthias Fenchel3, and Peter Speier3
1Pattern Recognition Lab, Department of Computer Science, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany, 2Erlangen Graduate School in Advanced Optical Technologies, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany, 3Magnetic Resonance, Product Definition and Innovation, Siemens Healthcare GmbH, Erlangen, Germany, 4Magnetic Resonance, Research and Development, Hardware, Siemens Healthcare GmbH, Erlangen, Germany
Synopsis
We evaluate the information content of externally generated Pilot Tone signals, received with standard MR local coils, with respect to cardiac motion. Free-breathing and breathhold fluoroscopic measurements were performed with applied electrocardiogram leads to provide ground truth. Average mean correlation between RR intervals of our method and the ground truth was 0.95. Our early results indicate that locally generated PT signals contain information about cardiac motion and suggest that the proposed method could be developed into an electrocardiogram replacement by providing a continuous signal for retrospective gating with minimal hardware requirements.Introduction
In cardiac MR imaging, prospective
electrocardiogram (ECG) triggering and retrospective ECG gating are the
established techniques to synchronize measurements to the patient’s cardiac
cycle. However, ECG placement takes time, inconveniences the patient and
requires additional materials, e.g. electrodes. We propose a method for
ECG-free detection of heartbeats, equivalent to detecting the pulse signal. Our
method is based on the Pilot Tone (PT) navigator proposed by Speier et al. [1] for respiratory motion
tracking. Our contributions comprise hardware improvements for the signal
generator as well as an algorithm for automated heartbeat evaluation in the PT
signal.
Methods
The PT signal is
generated by an independent continuous-wave radio frequency (RF) source and is received
by the standard MR local coils. Its modulation can be processed to extract respiratory
and cardiac information. We designed a small, battery-driven autonomous RF
source to replace the signal generation setup used in [1], which was located outside the bore of the MR scanner. This new transmitter generates the RF signal by means
of a free-running crystal oscillator and is protected against disruptive RF pulses of the MR measurement. Thus the hardware can be placed anywhere in
the MR bore close to the patient.
Measurements were performed on a 1.5 T MAGNETOM Aera (Siemens Healthcare, Erlangen, Germany) on four volunteers (1 female, age 38 $$$\pm$$$ 11), on one of
them with ECG ground truth. Multiple acquisitions with different locations and
distances to the volunteer (on the anterior coil, on the skin of the volunteer) of
the navigator hardware were performed.
Free-breathing and
breathhold fluoroscopic measurements (GRE, TR=4 ms, 4 images/s, resolution
2x2x10 mm$$${}^3$$$) were performed for different placements of
the PT transmitter. The prototype sequence recorded ECG timestamps
every TR as ground truth for time
after the R peak. A prototype reconstruction program processed PT
signals into a navigator matrix containing one value per channel per TR.
Offline processing
was performed in MATLAB (MathWorks, Natick, MA, USA).
To separate cardiac
and respiratory motion, we adopted the algorithm of Zhang et al. [2] and expanded it to detect cardiac motion directly.
We assume that the cardiac
motion is detected by at least one channel, and that at least one other channel
contains a mixture of both cardiac and respiratory motion information. The
problem of finding the best coils representing the cardiac motion can then be
described as maximizing the correlation of R peak ground truth detection and
peaks of the PT signal.
The proposed
algorithm has the following major steps (visualized in Figure 1):
1. Calculation of the covariance matrix
$$$C(i,j)$$$, which forms itself of the motion estimated from coil $$$i$$$ and
$$$j$$$, where $$$X_i$$$ and $$$X_j$$$ are the measured data of the coils:
$$
C(i,j) = \operatorname{cov}(X_i,X_j)
= E[(X_i-E[X_i])(X_j-E[X_j])]
$$
2. Band-pass filtering to restrict motion
information between 0.6 and 4.0 Hz using a Hann filter in frequency domain to construct $$$P(i,j)$$$.
3. Construction of a threshold reduced
matrix $$$M(i,j)$$$, according to a threshold operator described as follows:
$$
M(i,j) = \begin{cases}
1, & \text{if } |P(i,j)| \geq t
\\
0, & \text{otherwise}
\end{cases}
$$
4. Identification of existing correlations
in $$$M$$$ smaller than the threshold in $$$C(i,j)$$$.
$$
R(i,j) = \begin{cases}
1, & \text{if } M(i,j) \geq 0
\text{ and } |C(i,j)| \leq t\\
0, & \text{otherwise}
\end{cases}
$$
5. Selection of the set of channels $$$\{i | R(i,j) = 1\}$$$.
6. Time after the R wave from the PT navigator is
determined by peak detection of the mean signal from the remaining coils. Here
we selected the next peak after the ground truth R peak.
To validate the quality
of the pulse detection, we compared the
durations of cardiac intervals from PT navigator ($$${RR}_{pt}$$$) with durations
from ECG ($$${RR}_{ecg}$$$).
Results
Signals consistent with cardiac motion could be
detected in all volunteers. Average mean correlation between $$$RR_{pt}$$$
and $$$RR_{ecg}$$$ was 0.95 $$$\pm$$$ 0.038. The slope of the fitted regression
line was on average 0.98 (an example is illustrated in Figure 2). A Bland-Altman plot
of $$$RR_{pt} - RR_{ecg}$$$ (Figure 3) shows that the 95 % limits of agreement
line lies slightly below 40 ms. The improvement using our adapted coil clustering can be seen in Figure 4.
Step 3 of the algorithm depends on the threshold parameter $$$t$$$. Good
correlation with the ground truth was achieved for all tested transmitter positions for $$$t = 0.9$$$ or $$$0.95$$$ as shown in Table
1.
Conclusion
Our early results indicate that PT signals, locally generated in proximity to the heart, contain information about cardiac motion, and suggest that the proposed method could be developed into an ECG replacement by providing a continuous signal for retrospective gating with minimal hardware requirements.
Acknowledgements
The authors gratefully acknowledge funding of the Erlangen Graduate School in Advanced Optical Technologies (SAOT) by the German Research Foundation (DFG) in the framework of the German excellence initiative.References
[1] P. Speier et al. "PT-Nav: A Novel Respiratory Navigation Method for
Continuous Acquisition Based on Modulation of a Pilot Tone in the MR-Receiver". Proc. ESMRMB 129:97-98. 2015. doi: 10.1007/s10334-015-0487-2.
[2] T. Zhang et al. "Robust self-navigated body MRI using dense coil arrays.". Magn Reson Med. 2015. doi: 10.1002/mrm.25858. [Epub ahead of print]