Motion-corrected K-space Reconstruction for High Resolution Multi-shot Diffusion Imaging
Fuyixue Wang1, Zijing Dong1, Xiaodong Ma1, Erpeng Dai1, Zhe Zhang1, and Hua Guo1

1Center for Biomedical Imaging Research, Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, China, People's Republic of

Synopsis

Recently, several techniques have been developed to be capable of correcting shot-to-shot phase variations of multi-shot acquisition in order to obtain diffusion images with high spatial resolution. However, longer acquisition time of multi-shot EPI makes these methods more sensitive to bulk motion. In this work, we developed a novel k-space based motion corrected reconstruction method for 2D navigated multi-shot DWI. Motion simulations and in-vivo head motion experiments validated the effectiveness of the proposed method, which can remove the ghosting artifacts from minuscule motion and the blurring from bulk motion.

Target Audience

Researchers and clinicians interested in high resolution diffusion imaging.

Purpose

Multi-shot acquisition strategies have been used to obtain images with high spatial resolution for diffusion weighted imaging (DWI), but they are susceptible to motion-induced phase variations among different shots 1. In recent years, several techniques have been proposed to be capable of correcting shot-to-shot phase variations of multi-shot acquisition, including image domain methods 2,3 and k-space domain methods 4,5. However, these approaches result in blurred images and artifacts in presence of bulk motion of the subject. To address this problem, AMUSE 6 based on MUSE 2, one of typical image domain methods, has been developed. In this work, we describe a new approach to reduce bulk motion induced errors as an extension of the SYnergistic iMage reconstruction using PHase variatiOns and seNsitivitY (SYMPHONY) 3, a k-space reconstruction method for 2D navigated multi-shot DWI, in order to obtain high spatial resolution diffusion images in presence of bulk motion.

Methods

Theory The large-scale motion assumedly is the in-plane rigid motion (translation and rotation) occurred between interleaved acquisitions. The proposed method is divided into three steps: motion parameter estimation, motion correction and reconstruction as illustrated in Fig. 1. In the first step, the rotation angle relative to a reference shot is estimated by finding the angle with maximum correlation between the reference and the target shot, using the circular k-space region of the navigator center 7. Similarly, parameters of translation are also estimated using the navigator. In the second step, the linear phase shifts in k-space due to translation are directly removed. Since the rotation in the image domain corresponds to the rotation in k-space, rotation of the k-space with estimated angles is required to correct the errors. Instead of direct rotation of the k-space data which will lose high frequency signals, we choose to rotate the k-space sampling trajectory. In the third step, non-Cartesian SPIRiT-based 8 SYMPHONY is implemented on the corrected k-space data and the sampling trajectory. It extends the SPIRiT interpolation from coil dimension to shot-coil dimension, based on the theory that the k-space of different shots are encoded by phase variations 3. Finally, artifact-free images of all shots are reconstructed and summed into a final diffusion image. The original SYMPHONY is implemented for comparison with the proposed method.

Simulation Motion simulations were designed to evaluate the proposed method. A 32-channel non-diffusion weighted 8-shot EPI image was acquired from a healthy volunteer on a Philips 3T scanner (Philips Healthcare, Best, The Netherlands). To simulate large-scale motion, image of each shot was randomly rotated (-15~15°) and translated (-10~10 pixels) in the x and y direction. Then, spatially random phases (third-order) were added to the 8-shot data respectively, to simulate motion-induced phase variations in diffusion weighted images. The matrix size of the data was 240×232, navigator size was 240×25. 32 channels were compressed to 6 channels while 99% of information was preserved 9.

In-vivo motion In-vivo head motion experiments were performed to validate the effectiveness of the proposed method to correct rigid motions. The volunteer rotated his head about ±8° every 15s~25s during the acquisition. The multi-shot diffusion weighted images were acquired with the following parameters: number of shot=8, FOV=240×240 mm2, slice thickness=4 mm, TR/TE=3000/77 ms, in-plane image resolution=1×1 mm2, the number of diffusion directions=3, b value=800 s/mm2, navigator size is 89×29. Image coregistration between non-DW and DW images are used as corrections for both methods.

Results

Fig. 2 shows the reconstructed images by direct Fourier transform, the original SYMPHONY and the proposed method in simulation studies. The original SYMPHONY reduced motion-induced phase variations but resulted in severe blurring due to large-scale motion. By contrast, both motion-induced phase variations and bulk motion-induced blurring were removed by the proposed method. Fig. 3a shows the reconstructed 8-shot diffusion images of two slices with one diffusion direction in the in-vivo motion experiment, and Fig. 3b shows the corresponding averaged diffusion weighted images (3 diffusion directions). The proposed method removed most artifacts compared with the original SYMPHONY.

Discussion & Conclusion

The simulations and in-vivo motion experiments validated the effectiveness of the proposed method to remove both the ghosting artifacts from minuscule motion and the blurring from macroscopic motion. It can provide high-resolution diffusion weighted images with a large number of shots (8-shot in brain). The further development of the proposed method to deal with more complicated motion such as through-plane motion will be the focus of future research efforts.

Acknowledgements

Grant sponsor: This work was supported by National Natural Science Foundation of China (61271132, 61571258) and Beijing Natural Science Foundation (7142091).

References

1. Skare S, Newbould R D, Clayton D B, et al. Clinical multishot DW-EPI through parallel imaging with considerations of susceptibility, motion, and noise. Magnetic Resonance in Medicine, 2007, 57(5): 881-890.

2. Jeong H K, Gore J C, Anderson A W. High-resolution human diffusion tensor imaging using 2-D navigated multishot SENSE EPI at 7 T. Magnetic Resonance in Medicine, 2013, 69(3): 793-802.

3. Chen N, Guidon A, Chang H C, et al. A robust multi-shot scan strategy for high-resolution diffusion weighted MRI enabled by multiplexed sensitivity-encoding (MUSE). Neuroimage, 2013, 72: 41-47.

4. Xiaodong M, Zhe Z, et al. High Resolution Spine Diffusion Imaging using 2D-navigated Interleaved EPI with Shot Encoded Parallel-imaging Technique (SEPARATE). In Proceedings of the 23th Annual Meeting of ISMRM, Montreal, Canada, 2015. p. 2799.

5. Liu W, Zhao X, Ma Y, et al. DWI using navigated interleaved multishot EPI with realigned GRAPPA reconstruction. Magnetic Resonance in Medicine, 2015.

6. Guhaniyogi S, Chu M L, Chang H C, et al. Motion immune diffusion imaging using augmented MUSE for high-resolution multi-shot EPI. Magnetic Resonance in Medicine, 2015.

7. Pipe J G. Motion correction with PROPELLER MRI: application to head motion and free-breathing cardiac imaging. Magnetic Resonance in Medicine, 1999, 42(5): 963-969.

8. Lustig M, Pauly J M. SPIRiT: Iterative self-consistent parallel imaging reconstruction from arbitrary k-space. Magnetic Resonance in Medicine, 2010, 64(2): 457-471.

9. Zhang T, Pauly J M, Vasanawala S S, et al. Coil compression for accelerated imaging with Cartesian sampling. Magnetic Resonance in Medicine, 2013, 69(2): 571-582.

Figures

FIG. 1. Flow diagram of the motion-corrected SYMPHONY

FIG. 2. The reconstructed images of 4 slices by direct FFT, the original SYMPHONY without motion correction and the motion-corrected SYMPHONY in motion simulation.

FIG. 3. The results of the in-vivo motion experiment. (a) The reconstructed diffusion weighted images in one diffusion direction of the SYMPHONY and the motion-corrected SYMPHONY. (b) The averaged diffusion weighted images of 3 diffusion directions reconstructed by the SYMPHONY and the proposed method.



Proc. Intl. Soc. Mag. Reson. Med. 24 (2016)
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