Yossi Yovel1, Omri Zomet1, Arieli Bonzach2, Assaf Marom1, and Yaniv Assaf1
1Tel Aviv University, Tel Aviv, Israel, 2Beit Dagan Veterinary institute, Beit Dagan, Israel
Synopsis
Despite its importance, little is known
on the evolution of the mammalian brain. Previous work suggests that body size
and behavioral function are intertwined in their influence on the evolution of
the brain. Most previous studies focused on examining gray matter. Because the
underlying white matter connectome facilitates the connections between gray
matter areas, it must have simultaneously evolved to support gray matter
evolution. In this work we used a wide comparative approach relying on diffusion
MRI based fiber-tracking to reconstruct whole-brain structural connectomes and
explore its evolution. Introduction
Despite its importance, little is known
on the evolution of the mammalian brain. Previous work suggests that body size
and behavioral function are intertwined in their influence on the evolution of
the brain 1,2. Most previous studies focused on examining gray matter
and sometimes also white matter volume. Few studies, however, investigated white-matter
connectivity maps. Because the underlying white matter connectome facilitates
the connections between gray matter areas, it must have simultaneously evolved
to support gray matter evolution. Hence the evolution of white matter connectivity
is at least as important as that of gray matter. In this work we used a wide
comparative approach relying on diffusion MRI based fiber-tracking to
reconstruct whole-brain structural connectomes and explore its evolution.
Methods
Whole brain samples of 98 species
covering almost all mammalian orders (excluding monotremes) were scanned
(Mammalian MRI database = MAMI). The samples were of wild-life animals or
animals that expired in regional zoos whose brain was freshly excised, fixated
in formaldehyde and scanned subsequently (after rehydration in PBS). For some
of the species, more than one brain specimen was obtained resulting in 152
scanned samples. Brain samples who were smaller then 72mm
in the anterior-posterior and left-right directions were scanned on a 7T small
rodent scanner (biospec 30/70) and larger brains were scanned on a clinical MRI
scanner (Prisma 3T).
The imaging protocol included an
anatomical scan (T1- or T2-weighted MRI) and a HARDI scan at 64 gradient
directions with b=1000 s/mm2 and additional 3 images with b=0. The
matrix size was kept similar across all samples so that the resolution was
adjusted to the brain size. The matrix size for the anatomical scans was
160x120 over ~74 slices (in the human brain that corresponded to a
1.2x1.2x1.2mm3 resolution), the HARDI acquisition was performed with
matrix size of 128x96 and ~58 slices (in the human brain that corresponded to a
1.7x1.7x1.7 mm3). SNR was kept roughly similar across samples
(leading to variable acquisition time).
Fiber tracking was performed on the
HARDI data set using spherical harmonics deconvolutions 3. Following fiber-tracking a
connectivity matrix (from each voxel to all others) was computed and graph
related indices (e.g. mean short path, density, clustering coefficient,
efficiency etc) were computed and compared across all samples.
HARDI and fiber-tracking analysis were
performed in ExploreDTI 4 while graph theory analysis was
computed using in house matlab scripts.
Results
Fiber-tracking and network analysis of
the MAMI database (example shown in Fig. 1) revealed that:
1. The ratio between
gray matter and white matter was linear on a logarithmic scale with a slope 1.23
similar to literature values (Fig. 2).
2. The number of
fibers (streamlines) was roughly constant across mammals as well as the connectome mean short path (Fig. 3).
3. A large variability
in the formation of callosal fibers was observed (with several species from
different orders lacking the corpus callosum) which was compensated in the
association mass connectivity efficiency (Fig. 4).
4. Network analysis
revealed that the connectome across mammals can be regarded as a small world
network. The averaged short path between two points in all brains is 5-6 nodes.
5. Many aspects of the
connectome divert from the phylogenic tree.
Discussion and Conclusions
The MAMI database and fiber-tracking
analysis allows constructing a fine-grained description of brain connectivity
crossing many different species from distinct evolutionary stages and diverse
ecological environments. Surprisingly it was found that the efficiently of
connectivity is evolutionary preserved and independent of brain size (for
comparison: the smallest brain volume that was scanned was 0.14ml (trident bat)
and the largest was 1980ml (stripped dolphin)). While the different species
that were sampled differ dramatically in many aspects of the lives, the brain
representation of their cognitive system must be different. However, it appears
that enhancement of in one cognitive system may lead to different local
connectivity pattern while preserving the total connectivity mass and its
efficiency. The presented analysis is only the first analysis that was
performed on the database and obviously much more could be revealed on the
evolution of the connectome and specific brain regions. Characterizing the
structure of the observed brain networks will allow tracking both the impact of
the environment on brain connectivity, as well as its evolutionary development.
Acknowledgements
No acknowledgement found.References
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