Signe Johanna Vannesjo1, Falk Eippert1, Yazhuo Kong1, Stuart Clare1, Karla L Miller1, and Irene Tracey1
1FMRIB centre, NDCN, University of Oxford, Oxford, United Kingdom
Synopsis
Spinal cord MRI at ultra-high field poses considerable
technical challenges, especially related to static and dynamic B0 field
variations. We here investigated the magnitude and spatial profile of
breathing-induced B0 field fluctuations in the cervical spinal cord at 7T, by
comparing field maps acquired during breath-holds in an expired vs. inspired breathing
state. Breathing-related field fluctuations of up to 140Hz at the level of C7
were observed. We further implemented a proof-of-principle shim correction, demonstrating
the feasibility of using the shim system to compensate for the
breathing-induced fields.Purpose
To investigate the influence of the breathing cycle on the B
0
field in the cervical spinal cord at 7T, and explore the feasibility of
applying corrective shim fields.
Introduction
The spinal cord is a particularly challenging structure to
image with MRI, due to its small cross-sectional anatomy and its location deep
inside the body. For accurate depiction of small structures within the cord,
the SNR benefit of higher background field strengths is desirable. However, several
technical difficulties limit the implementation of ultra-high field spinal cord
imaging. Especially problematic are static and dynamic B0 field variations,
which cause image artifacts in the form of signal loss, ghosting and distortion.
A special case of dynamic B0
field variations are fields induced by the change in lung volume during the breathing
cycle. Breathing-related field fluctuations on the order of 10-20Hz have been reported
to significantly deteriorate quality of T2*-weighted images in brain imaging at
7T1. Due to the spine being closer to the thorax and the lungs, the breathing-related
fields will expectedly have an even stronger impact on spinal cord imaging. There
is, however, to date no study showing the extent of breathing-related B0
field variations in the spinal cord at ultra-high field.
Here we investigate the magnitude
and spatial profile of breathing-induced field fluctuations in the cervical
spinal cord at 7T. We further explore the feasibility of actively compensating
for the induced field changes by adjusting the shim settings according to
breathing state.
Methods
Spinal cord imaging of two healthy volunteers (male) was
performed on a Siemens Magnetom 7T system, using a volume transmit, 16-ch
receive cervical spine coil (Quality Electrodynamics). Fast low-resolution field
maps (FOV=152x152mm2, 2mm isotropic resolution, 11 sagittal
slices, TR=80ms, TE1= 4.08ms,
ΔTE=1.02ms, acq. time 12s) of the cervical
spinal cord were acquired during breath-holds, either in an expired or inspired
breathing state. The field map acquisitions were repeated three times per condition
in each subject. The field difference
between each pair of expired/inspired field maps
was quantified within a manually drawn mask covering the spinal cord.
In one subject, a shim correction was implemented to compensate for the breathing-induced fields. Initially, expired/inspired field maps
were acquired with a fixed shim field setting. Up to 2nd-order spherical
harmonic shim fields were then fit to the field difference within the spinal cord mask, assuming expiration as reference state. The
calculated correction shim settings were subsequently applied during the
inspired condition of a new field map acquisition pair within
the same scan session. The compensated acquisition pair was repeated
twice.
Results
A reproducible pattern of breathing-related field changes was
observed in both subjects (Fig. 1). The strength of the breathing-induced fields
was highly variable along the length of the spinal cord, reaching up to 140Hz
and 100Hz at the level of C7 for the two different subjects respectively (Fig.
2). At the level of C1 the difference was down to around 10Hz for both
subjects.
The field difference (ΔB0)
was greatly reduced by using 2nd-order shim compensation (Figs. 2 and 3). With compensation, ΔB0
maximally peaked at around 30Hz, and the variance along the cord was less. The
mean and the standard deviation of ΔB0 over all voxels within the
spinal cord mask were reduced by almost a factor of three as compared to uncompensated
acquisitions. Remaining offsets are likely to be attributed to variations in
the depth of the breath-hold between acquisitions.
Discussion and Conclusions
We here measured breathing-related field changes of up to
140Hz in the cervical spinal cord at 7T. This agrees well with a previous
study by Verma et al reporting breathing-related B0 field variations
of around 70Hz at the level of C7 at 3T2. Field variations on this order of
magnitude will be detrimental for any imaging sequences with long TE, including
functional MRI, T2*-weighted imaging and susceptibility-weighted imaging. In
single-shot EPIs the field variations will manifest as large image shifts, whereas
structural imaging will suffer heavily from ghosting. Through-slice field
gradients will furthermore contribute to dephasing and signal loss. There is
thus a strong need for correction strategies addressing the B0 field
variations.
We demonstrated a
proof-of-principle shim correction indicating that it would be feasible to
greatly reduce the level of fluctuations by adjusting the shim settings
according to the breathing state. Real-time shim updating to compensate for
breathing-induced field variations has previously been shown to improve brain imaging
at 7T3,4. The results here suggest that the benefit of such compensation
would be even greater for spinal cord imaging, especially for applications relying
on T2*-weighted sequences, such as functional imaging.
Acknowledgements
This
project has received funding from the Wellcome Trust Strategic Award and from the European Union’s
Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie
grant agreement No 659263.References
1. Versluis
MJ, et al. Origin and reduction of motion and f0 artifacts in high resolution
T2*-weighted magnetic resonance imaging: Application in Alzheimer’s disease
patients. NeuroImage 2010;51:1082–1088.
2. Verma T,
Cohen-Adad J. Effect of respiration on the B0 field in the human spinal cord at
3T. MRM 2014;72:1629-1636.
3. van Gelderen P, et al. Real-time
shimming to compensate for respiration-induced B0
fluctuations. MRM 2007;57:362–368.
4. Duerst
Y, et al. Real-time feedback for spatiotemporal field stabilization in MR
systems. MRM 2015;73:884–893.