Michal Považan1,2, Gilbert Hangel1, Bernhard Strasser1, Eva Heckova1, Lukas Hingerl1, Stephan Gruber1, Siegfried Trattnig1,2, and Wolfgang Bogner1
1High Field MR Center, Department of Biomedical Imaging and Image-guided Therapy, Medical University Vienna, Vienna, Austria, 2Christian Doppler Laboratory for Clinical Molecular MR Imaging, Vienna, Austria
Synopsis
Ultra-short
echo/acquisition delay MRS spectra have a strong characteristic background
consisting of macromolecule (MM) resonances superimposed on the signal of
metabolites. Typically a single metabolite-nulled MM spectrum is included into
quantification routine to account for this. To detect more prominent regional and pathologic changes,
we replaced this single MM spectrum by individual MM peaks. We found that the MM
peaks in a 2.3-0.5 ppm region are higher in gray matter compared to white
matter, whereas the MM peaks from 2.9 to 3.2 ppm were significantly higher in
white matter of healthy volunteers and one MS patient.Introduction
Ultra-short
echo/acquisition delay MRS spectra have a strong characteristic background
consisting of macromolecule (MM) resonances superimposed on the signal of
metabolites. Omission of MM contribution in the quantification of such spectra may
yield substantial errors in the quantified metabolite levels
1. As
shown previously, the simulation of MM background is insufficient at ultra-high
fields and a separate acquisition of MM was found to be more accurate
2.
Since regional differences of MM exist
even in the healthy brain and a further change of distinct MM resonances
3,4
was observed in various diseases, this single MM background should be replaced
by individual MM peaks to account for more prominent regional and pathologic changes.
Methods
An average MM
spectrum of the full spectral range was acquired using double inversion MRSI as
described previously
5 from 6 healthy volunteers (28±2 years).
Metabolite residuals were removed from the averaged spectrum and parameterized
by fitting using HLSVD implemented in jMRUI 5.2. Individual components
(altogether nine separate peaks - 0.91 ppm (MM1), 1.21 ppm (MM2), 1.43 ppm
(MM3), 1.67 ppm (MM4), 2.04 ppm (MM5), 2.26 ppm (MM6), 2.99 ppm (MM7), 3.21 ppm
(MM8), and 3.77 ppm(MM9)) were saved separately and included into the basis set.
Additionally, to assess the risk of over-parameterization several peaks were
combined into altogether 5 groups (MM1 (0.9ppm); MM2-MM4 (1.2-1.6ppm); MM5-MM6
(2.04-2.26ppm); MM7-MM8 (2.99-3.21ppm) and MM9 (3.77ppm)) and included in the
basis set.
Data from 3
volunteers (32±3 years) were measured with a Magnetom 7T (Siemens Healthcare,
Erlangen, Germany) scanner and 32 channel head coil (Nova Medical, Wilmington,
USA) with the following parameters: TR, 600 ms; TE*, 1.3 ms; flip angle, 45°;
FoV, 220 × 220 mm
2; matrix size, 64 × 64; nominal voxel size, 3.4 ×
3.4 × 12mm
3; scan time ~30 min; one average with an elliptically
sampled k-space acquired in a pseudo-spiral pattern; Data from one Multiple Sclerosis
patient were acquired using the same protocol and acceleration using 2D
Caipirinha
6 with acceleration factor R=6 and scan time of ~5 min.
These data
were quantified in LCModel 6.3 using three different basis sets: a) a full measured
MM spectrum, b) parameterized MM peaks and c) MM groups (Fig.1) and compared between
white matter (WM) and gray matter (GM). A small region of GM and WM (min. 80%
of the tissue) was defined in every volunteer.
Results
The data
from three volunteers are displayed in form of boxplots (Fig.4). The paired
t-test showed a significant difference between GM and WM levels for MM1, MM2,
MM3, MM4, MM6, MM7 and MM8. The MM1 through MM6 peaks ranging
from approximately 2.3 ppm to 0.5ppm were found to be higher in GM compared to
WM. On the contrary, the region from 3.2 ppm to 2.8 ppm showed to be
significantly higher in WM than in GM.
Discussion
We have
quantified MM levels of individual MM peaks, MM groups and the full MM spectrum as well as
created maps of their spatial distribution (Fig.2). Although the overall MM
background in healthy volunteers was found to be higher in GM than in WM
5,7, according to our findings this
applies only to MM resonances from 2.26 ppm to 0.9 ppm (MM1-MM6), whereas the
peaks at 2.9 ppm and 3.2 ppm (MM7-MM8) were higher in WM (Fig.2 and Fig.4).
These MM resonances play an important role in GABA quantification (the so called
GABA+ signal). A possible over-parameterization was excluded based on the
comparison of metabolite levels for all quantification methods (Fig.3). Results
obtained from a patient (Fig. 5) show that the basis set with parameterized MM
can be used also for MM mapping in diseases which was not possible with
unparameterized MM spectra due to a wild baseline. These results are however
preliminary and need further investigation.
Conclusion
Parameterization
of an averaged MM spectrum allowed us to detect subtle changes of individual MM
peaks and provided additional information on MM spatial distribution in brain
without biasing the metabolite quantification by over-parameterization.
Acknowledgements
No acknowledgement found.References
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