Streak artifact is very common in radial sampled images. One way we can reduce the artifact is to remove individual streaky coils by visually identification. Although it may not be a hard work, it’s time-consuming, especially when it comes to a large number of images. This abstract aims at developing an algorithm that can automatically detect these streaky coils, and suppress streak artifacts in reconstructed images.
Methods
Human Subjects & Pulse Sequence: We obtained cardiac perfusion MRI data acquired with 6.4-fold accelerated radial sampling (30 k-space lines per image) from 21 patients (9 males, 12 females, mean age=49.3 ± 14.9 years). Relevant imaging parameters included: FOV=300x300mm2, acquisition matrix=192x192, readout duration = 78 ms.
Image Reconstruction: We performed compressed sensing reconstruction as previously described 3.
Post-Processing: We developed our method based our observation that radial streaks manifest themselves in k-space and that only peripheral streaky coils should be eliminated for cardiac imaging. Note, streaky coils were identified visually based on zero-filled reconstruction of individual coils, which then served as ground truth. Step 1, we calculated the standard deviation of radial k-space along the ray dimension in polar coordinate space. As shown in Figure 1, streak coils have higher side lobes (see 3/8 and 6/8th k-space segments) compared with non-streaky coils. After dividing the k-space into 8 equal segments, we calculated the slope of the third and sixth segments and summed the absolute value of these two slopes. Step 2, we generated a mask based on 75% of maximum intensity and calculated the Euclidean distance between the centroid of the mask and the center of field of view. Step 3, we combined these two parameters to choose out streaky coils. For details, see Figure 1. The cutoff values of these two parameters were determined empirically based on training data sets from 5 patients.For validation, we applied our algorithm and the method by Xue et al. 2 for cardiac perfusion data from the remaining 16 subjects (2406 images, 3-4 short-axis planes, 0-3 long-axis planes,15-30 coils).
Data Analysis: For validation, we computed the accuracy of streaky coil detection using our method and the method by Xue et al.2. We performed CS reconstruction using all coils, streaky coils removed using our method. We also quantified the mean signal of left ventricular (LV) cavity before contrast arrival and the ratio of mean signal and standard deviation of LV cavity at peak enhancement, compared values of all coils and streaky coils removed using our method using a paired t-test.
1. Du J, Thornton FJ, Fain SB, Korosec FR, Browning F, Grist TM, Mistretta CA. Artifact reduction in undersampled projection reconstruction MRI of the peripheral vessels using selective excitation. Magn Reson Med 2004;51(5):1071-1076.
2. Xue Y, Yu J, Kang HS, Englander S, Rosen MA, Song HK. Automatic coil selection for streak artifact reduction in radial MRI. Magn Reson Med 2012;67(2):470-476.
3. Naresh N, Haji-valizadeh H, Aouad P,
Barrett M, Chow K, Ragin A, Collins J, Carr J, Lee D, Kim D. Accelerated,
first-pass cardiac perfusion pulse sequence with radial k-space sampling,
compressed sensing, and KWIC reconstruction tailored for visual analysis and quantification
of MBF. Magn Reson Med (in press).