Jakob Meineke1 and Tim Nielsen1
1Philips Research, Hamburg, Germany
Synopsis
We
demonstrate the data-consistency driven determination and correction of
B0-fluctuations induced by respiratory motion in 2D and 3D gradient-echo images
of the cervical spine. By promoting data-consistency in the multi-channel raw
data, it is possible to estimate the instantaneous off-resonance. Furthermore, we
demonstrate a marked improvement in image quality by correcting the k-space
data using the measured B0-fluctuations.
Introduction
Gradient-echo
MRI is sensitive to spatio-temporal variations of the B0-field (off-resonance).
This is one of the main obstacles for high-field spinal cord imaging [1], where
the fluctuations of the B0-field induced by respiratory motion in the chest can
lead to pronounced ghosting artifacts and intensity modulations. Previously, we
have described a method, dubbed consistency-navigation, to estimate B0-fluctuations directly from the inconsistency they produce in 3D multi-channel
raw data [2]. Here, we apply this method to gradient-echo imaging in the spine
and extend it to multi-slice 2D acquisitions.Methods
2D
and 3D gradient-echo images of the cervical spine of a healthy volunteer were
acquired with written informed consent on a 3T scanner (Achieva, Philips, Best,
The Netherlands) using four Flex coils arranged around the neck of the
volunteer.
Sequence parameters 2D gradient-echo: FOV (AP/RL): 201 mm × 201 mm, acquisition
voxel 0.7 mm × 0.7 mm, slice thickness 5 mm, slice gap 4 mm, 11 slices, TR/TE1/ΔTE: 500/6.6/6.6 ms, 3 echoes, slices acquired in
linear order in feet-head (FH) direction.
Sequence parameters RF-spoiled 3D gradient-echo: FOV (AP/RL/FH): 201 mm × 201 mm
× 104 mm, acquisition voxel 0.7 mm × 0.7 mm × 4 mm, TR/TE1/ΔTE: 36.8/6.6/6.6 ms, 5 echoes, profile order:
zy-order. For reference purposes, a phase-navigator was interleaved into the 2D
and 3D acquisition every 10 excitations to obtain an independent measure of the
off-resonance fluctuation [2].
The 3D complex raw data were processed as described in Reference [2]. Briefly,
images are reconstructed from the multi-channel k-space data using standard
coil-combination and Fourier-transform. The resulting image is mapped back to
k-space using the inverse transformation, i.e. by multiplying with the
coil-sensitivities followed by FFT. Finally, the phase-angle of the complex
ratio between the measured and the synthesized k-space data is computed. This phase-error
is proportional to ΔB0 at the acquisition time of the respective
k-space profile. An improved image can be reconstructed by using the estimated phase-error
to correct the measured k-space data. To improve the SNR of the estimated
B0-fluctuations, the complex ratio is averaged along the readout direction was
performed (after FFT) and temporally adjacent phase-encoding profiles were
averaged using a Gaussian low-pass filter with width=3*TR.
For the 2D data, processing was performed analogously for each slice. However,
since temporally adjacent profiles are now in different slice, we now average
the computed ratio across neighboring slices using a Gaussian-low pass filter
with a width of 1 slice.
The above process was iterated for 30 iterations to ensure convergence.Results
For
both 2D and 3D images a stable consistency-navigator signal could be derived,
see Figure 1. Amplitudes of the B0-fluctuations are between
2 and 7 Hz depending on the distance to the chest, see Figure 2. As can be
expected, this is significantly larger than the frequency fluctuations observed
in the brain at 3T. Furthermore, correcting for the estimated phase-error
induced by the B0-fluctuations leads to marked improvements in both 2D and 3D
images, with reduced ghosting and removed intensity modulations, as well as
better tissue delineation, see Figures 3 and 4. The rate of convergence was
faster for 3D as compared to 2D data, with only tiny changes occurring after 10
(20) iterations for 3D (2D). The B0-fluctuations estimated from data
consistency are in good agreement with the values estimated from the phase-navigator.Discussion
We
have demonstrated the successful application of our previously described
consistency navigator to 2D and 3D GRE imaging of the cervical spine. This is useful
for improving robustness and image-quality of gradient-echo imaging in the
spine and does not require modification of the sequence or additional hardware.
The number of iterations needed for the method to converge is larger than for
previous applications in the brain, most likely due to the smaller number of
coil-elements, and, in the case of 2D imaging, the smaller number of profiles
mixed during in the coil-combination process. Due to the arrangement of the
coil elements around the neck of the volunteer, no information about the
spatial variation of the B0-fluctuations in the FH-direction can be derived in
the 3D case. The 2D data, in contrast, offer explicit spatial information via
slice-excitation, leading to more complete correction of B0-fluctuation
artifacts in this case.Acknowledgements
No acknowledgement found.References
1. Vannesjö et al, Spatiotemporal characterization of
breathing-induced B0 field fluctuations in the cervical spinal cord at 7T,
NeuroImage 167, 191 (2018)
2. Meineke and
Nielsen, Data-Driven Determination and Correction of B0-fluctuations in
Greadient-Echo MRI, ISMRM 2018