Brain connectivity assessed by mechanical covariance
Haitao Ge1,2, Armando Manduca3, David T. Jones4, Clifford R. Jack JR1, John Huston III1, Richard L. Ehman1, and Matthew C. Murphy1
1Radiology, Mayo Clinic, Rochester, MN, United States, 2School of Medical Imaging, Xuzhou Medical University, Xuzhou, China, 3Physiology and Biomedical Engineering, Mayo Clinic, Rochester, MN, United States, 4Neurology, Mayo Clinic, Rochester, MN, United States
Synopsis
The human connectome is a
comprehensive representation of the brain’s network architecture. Novel imaging
tools may provide new insights into this organization in both health and
disease. Given the established sensitivity of the brain’s mechanical properties
to its function, we test whether MR elastography-based stiffness estimates can
be used to measure brain connectivity. We show that the mechanical connectivity
network (MCN) is significantly correlated with established structural and
functional connectivity methods, and also exhibits the expected small world
organization. Nonetheless, MCN topological measures significantly differ from
the existing methods, suggesting MRE may provide a new perspective on the brain’s
organization.The human connectome is a
comprehensive representation of the brain’s network architecture. Novel imaging
tools may provide new insights into this organization in both health and
disease. Given the established sensitivity of the brain’s mechanical properties
to its function, we test whether MR elastography-based stiffness estimates can
be used to measure brain connectivity. We show that the mechanical connectivity
network (MCN) is significantly correlated with established structural and
functional connectivity methods, and also exhibits the expected small world
organization. Nonetheless, MCN topological measures significantly differ from
the existing methods, suggesting MRE may provide a new perspective on the brain’s
organization.
MRI-based
measures play an important role in the field of connectomics, which aims to map
the brain’s network organization in health and disease. Novel imaging tools may
provide new insights into this organization. In this work, we tested whether MR
elastography-based stiffness estimates can be used to measure brain
connectivity. The mechanical connectivity network (MCN) was significantly
correlated with established structural and functional connectivity methods, and
also exhibited the expected small world organization. Nonetheless, MCN
topological measures significantly differed from the existing methods,
suggesting MRE may provide a new perspective on the brain’s organization.
Introduction
The field of connectomics
provides both basic insights into the brain’s organization and a framework for
investigating disease-driven changes to this organization. Given the complexity
of the brain’s network architecture, there is a constant demand for novel and
improved methods to interrogate its organization. Magnetic resonance
elastography (MRE) is a non-invasive MRI technique for measuring tissue
mechanical properties1, which
are thought to reflect both the composition and organization of the brain
parenchyma2-6. MRE-based
stiffness estimates have demonstrated sensitivity to brain disorders7, 8, normal brain development9, aging10, 11 and behavioral performance12, 13. Given this sensitivity of the brain’s mechanical
properties to its function, here we tested the hypothesis that MRE-based
measures of brain stiffness can be used to assess the brain’s organization.
This hypothesis was evaluated in two ways. First, we tested whether mechanical
connectivity, defined as the correlation across different subjects between two
defined brain regions, was correlated with established measures of both structural
connectivity (as assessed by DTI) and functional connectivity (as assessed by
resting state fMRI) by calculating the graphical similarity between
the mechanical connectivity network (MCN) with each of the structural
connectivity network (SCN) and functional connectivity network (FCN). Second,
we tested whether the MCN follows the expected small world organization as
established in literature14.
Finally, we compared the topological organization between MCN with
that of the SCN and FCN.
Methods
Forty-four normal aging subjects were included in this study using
previously described acquisition methods10.
T1-weighted images were acquired to perform AAL parcellation
(78 cortical regions) to define the network nodes. To estimate the MCN,
stiffness maps were computed for each subject using a neural network inversion15. Mean stiffness in each region was
computed for all subjects, followed by the computation of the Pearson
correlation across subjects between each pair of regions. SCN was computed from
separately acquired DTI data16
using the PANDA toolbox17, in
which edge strength was defined as the mean fractional anisotropy in a tract
connecting a given pair of nodes. FCNs for each individual were computed from
resting state fMRI data (acquired and preprocessed as previously described18) by computing the mean time course in
each AAL region followed by computation of the Pearson correlation matrix. The
mean SCN/FCN across individuals was computed for comparison to the MCN. All
data were processed in a custom sample-based template space. In order to estimate the
statistical significance of differences between MCN and SCN/FCN, we generated
1000 bootstrap networks by random resampling of subjects with
replacement and recalculating the connectivity matrices19. In addition, we also generated 1000
random networks to preserve the topology of the bootstrap networks (with the
same number of nodes/total edges and degree distribution) to estimate the similarity
that would be expected by chance20.
We employed normalized Hamming distance (Snorm) to assess the
similarity in connectivity patterns between the thresholded binary networks at
varying degrees of density21.
Then we tested the small world topology of MCN and compared the topological organization
(including clustering coefficient and global/local efficiency) between MCN and
SCN/FCN at the global level. Since each of the metrics has been computed over a
specific density range, we estimated the integrals of each metric curve over
the range as the summary metric.
Results & Discussion
Mean connectivity graphs for each method are shown in Figure 1. Similarity
analysis indicated a higher similarity between MCN and SCN/FCN (about 60%) when
compared with that of randomly simulated networks over the entire range of
density (Fig.2, all p values <10-10). Taken together, the results
suggest that the MCN reported a network architecture that is significantly
correlated with those reported by SC and FC. Furthermore, the small worldness
of the MCN was >1 across the entire range of density, just as observed in
the SCN and FCN (Fig. 3, all p values <10-10). The
small worldness for MCN appeared more closely related to that of FCN than SCN. Despite
these similarities, most pair-wise comparisons of network topology were
significantly different between the three methods (Fig. 4). Differences in
network topology were a function of network density, but were also observed in
the summary measures of topology.
Conclusion
Mechanical connectivity, while significantly related to both structural and functional connectivity, also produces a network with significantly different topological measures. As such, MRE provides a potentially new window into the brain’s organization. Future studies may consider the use of multiple mechanical parameters to compute the MCN, as well as the effects of aging and disease on the mechanical connectome.
Acknowledgements
This study was supported by National Institutes of Health grant R37-EB001981
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Figures
Figure 1. The weighted/binary connectivity matrix for
MCN/SCN/FCN. Maximum value of the
density range (0.45) is chosen to show the binary connectivity matrix.
Figure 2. (A) Similarities between MCN and SCN and (B)
similarities between MCN and FCN across the entire density range.
Figure 3. The small worldness of MCN/SCN/FCN for both real
and bootstrap data.
Figure 4. (A) Clustering coefficient and (B) AUC of clustering
coefficient, (C) global efficiency and (D) AUC of global efficiency, (E) local
efficiency and (F) AUC of local efficiency of MCN/SCN/FCN for bootstrap
data. Stars (***) indicate p values less
than 0.001.