Jürgen Finsterbusch1 and Caspar Florin1
1Department of Systems Neuroscience, University Medical Center Hamburg-Eppendorf, Hamburg, Germany
Synopsis
Zonal oblique
multi-slice (ZOOM) EPI uses cross-sectional RF excitations to focus the measurement
volume to a small, inner volume which allows to reduce the FOV without aliasing
in the phase-encoding direction. Thus, geometric distortions are reduced and
the spatial resolution of diffusion-weighted acquisitions can be increased as
has been demonstrated for the optic nerve and spinal cord. In this study,
ZOOM-EPI is combined with simultaneous multi-slice (SMS), the
boundary condition to avoid unwanted signal contributions is determined, and
the feasibility to shorten acquisitions times is demonstrated for
diffusion-tensor imaging (DTI) of the human spinal cord.
Introduction
Spin-echo
echo-planar imaging (EPI)1 is the standard technique for
diffusion-weighted acquisitions but suffers from geometric distortions in the
presence of field inhomogeneities. The distortions increase with the echo train
length and, thus, are more pronounced for larger fields-of-view (FOVs) and
higher spatial resolutions which limits the applicability of EPI to small, inner structures like the optic nerve or the spinal cord. To shorten the
echo train and reduced geometric distortions accordingly, zonal oblique
multi-slice (ZOOM) EPI2,3 has been proposed. It involves
cross-sectional RF excitations to focus the refocussed magnetization to an
inner volume which allows to reduce the FOV without aliasing in the phase-encoding
direction.
In this study,
ZOOM-EPI is combined with simultaneous multi-slice (SMS)4, the
boundary condition to avoid unwanted signal contributions is determined, and
the feasibility to shorten acquisitions times is demonstrated for
diffusion-tensor imaging (DTI) of the human spinal cord.Methods
The pulse
sequences and geometric setups used in the present study are sketched in Fig. 1
and 2. The plane of the initial RF excitation is tilted by an angle φ
compared to the image plane defined by the refocussing
RF pulse. On both sides of the desired inner FOV, transition zones are excited
and refocused which requires phase-encoding oversampling to avoid aliasing. Furthermore,
neighboured sections are partially covered and saturated by the tilted RF
excitation. Thus, the angle φ must be chosen as a compromise between minimum saturation effects
and small transition zones.
To extend the
conventional approach (Fig. 1a and 2a) to simultaneous multi-slice
imaging, both RF pulses must cover multiple frequency bands (Fig. 1b
and 2b). As an unwanted side effect, magnetization outside of the target region
can be excited and refocused by the bands of different slices. However, they
can be positioned outside of the object to avoid their unwanted signal
contributions if the tilt angle φ obeys tan φ < g/(f+max(x1, x2)) (g: minimum gap between
the simultaneously acquired slices, f:
desired inner FOV; xi:
distances from inner FOV to object boundary on different sides in the different slices; cf. Fig. 2b). Furthermore, additional gradient
pulses to use the blipped-CAIPI approach4 were applied in the slice direction.
Experiments were
performed on a 3T whole-body MR system (PrismaFit, Siemens Healthineers,
Erlangen, Germany) using a 64-channel head-neck coil together with a 32-channel
spine array coil with only those coil elements selected that provide significant
signal contributions for the chosen measurement volume. A water phantom was
used for test experiments, in vivo acquisitions (62 slices, no gap)
were performed in healthy volunteers after their informed consent was obtained.
Images were acquired with a voxel size of 1.0×1.0×4.0mm3, a tilt angle φ of 5°, an inner FOV of 40mm plus 20mm phase-encoding oversampling
to account for the transition zones, and involved an interleaved excitation
order due to saturation in directly neighboured sections. Diffusion-tensor
imaging was performed with six different directions of the diffusion weighting,
a b value of 625s mm-2
yielding an echo time of 75ms, and 12 averages. SMS acquisitions were
accelerated by a factor of 2 which allowed to shorten the repetition time from 7300ms
to 3700ms and the total acquisition time from 10.5min to 5.7min, slightly less
than a factor of 2 due to the extra reference acquisitions required for SMS
imaging. Isotropic diffusion-weighted images and maps of the apparent diffusion
coefficient (ADC) and fractional anisotropy (FA) were obtained with
the analysis framework provided by the manufacturer.Results and Discussion
Non-diffusion-weighted
images of the human brain stem and spinal cord are presented in Fig. 3. For
lower cord sections, the signal intensity is considerably reduced due to the
lower performance of the receive coils. No adverse effect like residual
aliasing or noise amplification is observed for the SMS acceleration.
Results of a DTI
experiment are summarized in Fig. 4. The conventional and SMS acquisitions
show a very similar performance despite the much shorter repetition and acquisition
time of the SMS acquisition. Due to the small FOV, only minor geometric
distortions are visible in the spinal cord. Color-coded maps of the FA show a
reduced anisotropy in spinal cord grey matter, reflect the nerve fibre
orientation in white matter, and show some of the fibre crossing of transverse
pontine fibres with the pyramidal tracts.
Conclusion
For an
appropriately chosen tilt angle, ZOOM-EPI can be accelerated with SMS
acquisitions without side effects. Thus, DTI acquisitions of small target
regions like the optic nerve or spinal cord can be shortened which could improve
the clinical applicability in patients.Acknowledgements
This work was supported by a grant from Wings for
Life.References
1. Mansfield P. Multi-planar image formation using NMR
spin echos. J Phys C. 1977; 10: 55-58.
2. Wheeler-Kingshott CA, Parker GJ, Symms MR, Hickman
SJ, Tofts PS, Miller DH, Barker GJ. ADC mapping of the human optic nerve:
increased resolution, coverage, and reliability with CSF-suppressed ZOOM-EPI.
Magn Reson Med 2002; 47: 24-31.
3. Wheeler-Kingshott CA, Hickman SJ, Parker GJ,
Ciccarelli O, Symms MR, Miller DH, Barker GJ. Investigating cervical spinal
cord structure using axial diffusion tensor imaging. Neuroimage 2002; 16: 93-102.
4. Setsompop K, Gagoski BA, Polimeni JR, Witzel T, Wedeen VJ, Wald
LL. Blipped-controlled aliasing in parallel imaging for simultaneous multislice
echo planar imaging with reduced g-factor penalty. Mag Reson Med 2012; 67:
1210-1224