Giske Opheim1,2, Melanie Ganz-Benjaminsen1,3, Patrick Fisher1, Ulrich Lindberg4, Mark Bitsch Vestergaard4, Helle Juhl Simonsen4, Henrik Bo Wiberg Larsson4, Anne-Mette Leffers5, Camilla Gøbel Madsen5, Olaf Bjarne Paulson1, and Lars Hageman Pinborg1,2
1Neurobiology Research Unit, Dept. of Neurology, Rigshospitalet, Copenhagen, Denmark, 2Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark, 3Dept. of Computer Science, University of Copenhagen, Copenhagen, Denmark, 4Functional Imaging Unit, Dept. of Clinical Physiology, Nuclear Medicine and PET, Rigshospitalet - Glostrup, Copenhagen, Denmark, 5Dept. of Diagnostic Radiology, Centre for Functional & Diagnostic Imaging and Research, Hvidovre Hospital, Copenhagen, Denmark
Synopsis
Identifying
lesions at 3T MRI remains the most important correlate to epilepsy surgery
outcome. Since 45% of candidates present with negative 3T MRI, investigation of
diagnostic yield of clinical 7T MR protocols along with post-processing markers
is urged. This ongoing study will evaluate how radiological descriptions and
computational morphometrics affect presurgical decisions.
So far, 19 patients and 31 controls are scanned at the Philips Achieva 7T
system at Hvidovre Hospital,
Denmark. Preliminary
analyses of automatic segmentations show promising potential. We are in
radiological training, but expect first case with evaluation of impact on
presurgical decision to start around new-year 2018/2019.
Introduction
Identification
of an epileptogenic lesion on MRI at conventional field strengths is considered
the most important correlate of surgical outcome1. As 45% of surgical candidates present with negative MRI, investigations of the diagnostic yield of radiological
assessment of submillimeter resolution scans with higher SNR from 7T have
already been published2-4. These studies vary in basis for comparison
and study design, and therefore also the conclusions with regards to effect of
7T MRI on detection rates, as well as delineation details of epileptogenic
lesions. Further, investigation of targeted post-processing MRI markers is urged5-6. This ongoing study will analyze the sensitivity and specificity of targeted structural 7T MR metrics as markers of
the seizure focus and pathways, and prospectively evaluate their impact on decisions made
about patients included
in the Danish Epilepsy Surgery (DES) program. Scans and Analysis
So far, we have recruited 19 epilepsy patients and 31 healthy controls (HCs) at the Philips Achieva 7T
system at Hvidovre Hospital, which was upgraded to software Release 5.1.7 before project start. The structural protocol consists of five scans (3D MPRAGE, 3D FLAIR, 3D T2, and two T2 slabs) to proximate the current 3T protocol set by DES, see Fig. 1 for T2 image examples. All scans are performed with a 32/2 Tx/Rx channel Nova Head Coil, and we use dielectric pads to adjust for field imhomogeneities. Scan duration is 55 minutes, due to an additional functional MRI protocol.
Here, we can present preliminary analysis of cortical thickness- and
hippocampal subfield segmentations in Freesurfer 6.0 (Fig. 2). All computations are done for both 7T and 3T data. They are
based on 3D T1-images, and for hippocampal subfield segmentation, also on an
overlay with the 3D
T2-images. The 3D T1-weighted images from 7T are subjected to bias field correction prior to cortical reconstructions, in order to assure high quality of the surface reconstructions. The radiological assessment is performed by two experienced neuro-radiologists who are specialized in epilepsy pathology. Results
The computational results have been assessed for 15 single patients so far. Results for 7T and 3T hippocampal subfield segmentation
concur for patients with mesial temporal sclerosis (MTS) diagnosis (Fig. 3), though 7T results seem more sensitive. We are still in the radiological
training process, but some preliminary visual assessments have been made. E.g, patient
5, a patient with right-sided polymicrogyria as the only clinical finding on 3T
MRI, displays hippocampal asymmetry with all right subfields and whole right
hippocampus being larger than the left on the 7T image, while only certain
subfields (but not whole hippocampal volume) display significant asymmetry on
the 3T image. Hippocampal pathology was not detected during radiological assessment.
Patient 10, the second case of polymicrogyria, does not display the same degree
of hippocampal asymmetry for neither 7T or 3T data. Seen together, this may indicate that there is also pathology in the hippocampi/temporal lobe of patient
5, which in turn might have an impact on presurgical decisions. Results from cortical parcellations seem to display random variabilities
in thickness, asymmetries between hemispheres, and 7T vs 3T differences for HCs and all patients, except patients 5 and 10, who have unilateral
polymicrogyria. Conclusive remarks
These preliminary assessments demonstrate a potential
for including automatically segmented cortical regions and hippocampal
subfields in this epilepsy patient group. All reconstructions are
performed with minimal manual correction of surfaces for both 3T and 7T data,
and thus perform at a satisfactory level. This may therefore serve as basis for,
e.g., automatic detection of cortical regions with significant thickness
abnormalities, which is of interest during epilepsy diagnostics.
Albeit the systematic radiological descriptions of 7T MR images are still on
their way, our impression is that the standard and more directly comparable (to
3T) clinical scan protocol yields images of overall good quality.
The current patient group is too heterogeneous,
and thus the various sample sizes (patient subgroups) are yet too small to do
any quantitative group comparison and explanation of 7T vs. 3T differences in
thickness and volumes. We will continue the inclusion of epilepsy patients
through 2020.
The first impact evaluation case with this "7T MR
package" of targeted computational results together with radiological
descriptions is expected to start around new-year 2018/2019.Acknowledgements
We acknowledge the sponsors of the Danish national 7T MR project: The Danish Agency for Science, Technology and Innovation grant no. 0601-01370B, and The John and Birthe Meyer Foundation. Further, we acknowledge the continuous assistance with ad hoc scanning issues as well as finetuning of sequences from Esben Thade Petersen, Vincent Boer, Anouk Marsman (7T Core Group, Danish Research Centre for Magnetic Resonance) and Jan Ole Pedersen (Clinical MR Scientist, Philips). The project is supported by the Danish Council for Independent Research | Medical Sciences grant no. DFF-7016-00151 and by the Lundbeck Foundation grant no. R280-2017-3925.References
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